RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	HSPB8	Q9UJY1	196 aa		11.42	□□□□□ -0.58
GMDS-204	ENST00000476972	IGLV1-50	A0A075B6I6	118 aa		11.41	□□□□□ -0.58
GMDS-204	ENST00000476972	LINC00158	P58513	81 aa		11.41	□□□□□ -0.58
GMDS-204	ENST00000476972		A0A0U1RRA0	63 aa		11.4	□□□□□ -0.58
GMDS-204	ENST00000476972	FABP4	P15090	132 aa		11.4	□□□□□ -0.58
GMDS-204	ENST00000476972	RPL24	P83731	157 aa	Known RBP	11.4	□□□□□ -0.58
GMDS-204	ENST00000476972	PLN	P26678	52 aa		11.38	□□□□□ -0.59
GMDS-204	ENST00000476972	SMIM13	P0DJ93	91 aa		11.37	□□□□□ -0.59
GMDS-204	ENST00000476972	MEIG1	Q5JSS6	88 aa		11.37	□□□□□ -0.59
GMDS-204	ENST00000476972	KRTAP13-1	Q8IUC0	172 aa		11.37	□□□□□ -0.59
GMDS-204	ENST00000476972	NDUFA12	Q9UI09	145 aa		11.37	□□□□□ -0.59
GMDS-204	ENST00000476972	UBE2A	P49459	152 aa		11.36	□□□□□ -0.59
GMDS-204	ENST00000476972	TSPEAR-AS2	P59090	65 aa		11.36	□□□□□ -0.59
GMDS-204	ENST00000476972	HERV-K104	P63124	156 aa		11.36	□□□□□ -0.59
GMDS-204	ENST00000476972	PMCHL2	Q9BQD1	86 aa		11.36	□□□□□ -0.59
GMDS-204	ENST00000476972	DPM2	O94777	84 aa		11.35	□□□□□ -0.59
GMDS-204	ENST00000476972	RPL13A	P40429	203 aa	Known RBP	11.35	□□□□□ -0.59
GMDS-204	ENST00000476972	TMEM238	C9JI98	176 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	LEPROT	O15243	131 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BK	O60814	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BJ	P06899	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BO	P23527	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BB	P33778	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BD	P58876	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BC	P62807	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST2H2BE	Q16778	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BH	Q93079	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BN	Q99877	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	HIST1H2BM	Q99879	126 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	TMEM126A	Q9H061	195 aa		11.34	□□□□□ -0.59
GMDS-204	ENST00000476972	MUC2	Q02817	5179 aa		11.33	□□□□□ -0.6
GMDS-204	ENST00000476972	MYMX	A0A1B0GTQ4	84 aa		11.33	□□□□□ -0.6
GMDS-204	ENST00000476972	ATP6V1G1	O75348	118 aa		11.33	□□□□□ -0.6
GMDS-204	ENST00000476972	MIR7-3HG	Q8N6C7	128 aa		11.33	□□□□□ -0.6
GMDS-204	ENST00000476972	IGKC	P01834	107 aa		11.32	□□□□□ -0.6
GMDS-204	ENST00000476972	PLEKHB2	Q96CS7	222 aa		11.32	□□□□□ -0.6
GMDS-204	ENST00000476972	MAP1LC3C	Q9BXW4	147 aa		11.32	□□□□□ -0.6
GMDS-204	ENST00000476972		M0R378	163 aa		11.31	□□□□□ -0.6
GMDS-204	ENST00000476972	HERVK_113	P61574	105 aa		11.31	□□□□□ -0.6
GMDS-204	ENST00000476972	PRLH	P81277	87 aa		11.31	□□□□□ -0.6
GMDS-204	ENST00000476972	FAM19A1	Q7Z5A9	133 aa		11.31	□□□□□ -0.6
GMDS-204	ENST00000476972		A0A087X002	238 aa		11.3	□□□□□ -0.6
GMDS-204	ENST00000476972	LINC00587	B1AMM8	73 aa		11.3	□□□□□ -0.6
GMDS-204	ENST00000476972		J3QQQ9	107 aa		11.3	□□□□□ -0.6
GMDS-204	ENST00000476972	BOD1L2	Q8IYS8	172 aa		11.3	□□□□□ -0.6
GMDS-204	ENST00000476972	NCR3	O14931	201 aa		11.27	□□□□□ -0.61
GMDS-204	ENST00000476972	LGALS3	P17931	250 aa	Known RBP	11.26	□□□□□ -0.61
GMDS-204	ENST00000476972	NMU	P48645	174 aa		11.26	□□□□□ -0.61
GMDS-204	ENST00000476972	DAND5	Q8N907	189 aa		11.26	□□□□□ -0.61
GMDS-204	ENST00000476972	ANAPC11	Q9NYG5	84 aa		11.26	□□□□□ -0.61
GMDS-204	ENST00000476972	SYS1-DBNDD2	H3BUS1	97 aa		11.25	□□□□□ -0.61
GMDS-204	ENST00000476972	CRYGA	P11844	174 aa		11.25	□□□□□ -0.61
GMDS-204	ENST00000476972	IGKV2D-26	A0A0A0MRZ7	120 aa		11.23	□□□□□ -0.61
GMDS-204	ENST00000476972	PRR4	Q16378	134 aa		11.23	□□□□□ -0.61
GMDS-204	ENST00000476972		E9PLD3	99 aa		11.22	□□□□□ -0.61
GMDS-204	ENST00000476972	PRY	O14603	147 aa		11.22	□□□□□ -0.61
GMDS-204	ENST00000476972	TYMSOS	Q8TAI1	123 aa		11.22	□□□□□ -0.61
GMDS-204	ENST00000476972	FAM229B	Q4G0N7	80 aa		11.21	□□□□□ -0.61
GMDS-204	ENST00000476972	KRTAP13-2	Q52LG2	175 aa		11.21	□□□□□ -0.61
GMDS-204	ENST00000476972	LOC107984156	A0A0G2JMH3	177 aa		11.2	□□□□□ -0.62
GMDS-204	ENST00000476972	LINC01545	Q5VT33	79 aa		11.2	□□□□□ -0.62
GMDS-204	ENST00000476972	ARL17A	Q8IVW1	177 aa		11.2	□□□□□ -0.62
GMDS-204	ENST00000476972	HIGD2A	Q9BW72	106 aa		11.2	□□□□□ -0.62
GMDS-204	ENST00000476972	TRBV10-3	A0A0K0K1G6	114 aa		11.19	□□□□□ -0.62
GMDS-204	ENST00000476972	COA6	Q5JTJ3	125 aa	Known RBP	11.19	□□□□□ -0.62
GMDS-204	ENST00000476972	KCNQ1DN	Q9H478	68 aa		11.19	□□□□□ -0.62
GMDS-204	ENST00000476972		A0A0J9YXY3	114 aa		11.18	□□□□□ -0.62
GMDS-204	ENST00000476972	SPRR1A	P35321	89 aa		11.18	□□□□□ -0.62
GMDS-204	ENST00000476972	PET117	Q6UWS5	81 aa		11.18	□□□□□ -0.62
GMDS-204	ENST00000476972	LINC00337	Q8N6G1	96 aa		11.17	□□□□□ -0.62
GMDS-204	ENST00000476972	MIEN1	Q9BRT3	115 aa		11.17	□□□□□ -0.62
GMDS-204	ENST00000476972	C3orf79	P0CE67	100 aa		11.16	□□□□□ -0.62
GMDS-204	ENST00000476972	TRBV10-2	A0A0K0K1G8	114 aa		11.15	□□□□□ -0.62
GMDS-204	ENST00000476972	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.15	□□□□□ -0.62
GMDS-204	ENST00000476972	TSPAN13	O95857	204 aa		11.15	□□□□□ -0.62
GMDS-204	ENST00000476972	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.15	□□□□□ -0.62
GMDS-204	ENST00000476972	ETDC	A0A1B0GVM5	59 aa		11.14	□□□□□ -0.63
GMDS-204	ENST00000476972	NPC2	P61916	151 aa		11.14	□□□□□ -0.63
GMDS-204	ENST00000476972	ADAMTSL4-AS1	Q5T5F5	129 aa		11.14	□□□□□ -0.63
GMDS-204	ENST00000476972	SOSTDC1	Q6X4U4	206 aa		11.14	□□□□□ -0.63
GMDS-204	ENST00000476972	EIF4EBP3	O60516	100 aa	Predicted RBP	11.13	□□□□□ -0.63
GMDS-204	ENST00000476972	DDT	P30046	118 aa		11.13	□□□□□ -0.63
GMDS-204	ENST00000476972	KRTDAP	P60985	99 aa		11.13	□□□□□ -0.63
GMDS-204	ENST00000476972	NDUFC2	O95298	119 aa		11.12	□□□□□ -0.63
GMDS-204	ENST00000476972	S100A12	P80511	92 aa		11.12	□□□□□ -0.63
GMDS-204	ENST00000476972	SPRR4	Q96PI1	79 aa		11.12	□□□□□ -0.63
GMDS-204	ENST00000476972	LINC00304	Q8N9R0	145 aa		11.1	□□□□□ -0.63
GMDS-204	ENST00000476972	LITAF	Q99732	161 aa		11.1	□□□□□ -0.63
GMDS-204	ENST00000476972	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.1	□□□□□ -0.63
GMDS-204	ENST00000476972	ZNF815P	A8K554	130 aa		11.09	□□□□□ -0.63
GMDS-204	ENST00000476972	C3orf22	Q8N5N4	141 aa		11.09	□□□□□ -0.63
GMDS-204	ENST00000476972	SMCR5	Q8TEV8	140 aa		11.09	□□□□□ -0.63
GMDS-204	ENST00000476972	TTTY13	Q9BZ97	58 aa		11.09	□□□□□ -0.63
GMDS-204	ENST00000476972		B5MCH6	92 aa		11.08	□□□□□ -0.64
GMDS-204	ENST00000476972	IGLV6-57	P01721	117 aa		11.08	□□□□□ -0.64
GMDS-204	ENST00000476972	S100A7L2	Q5SY68	101 aa		11.08	□□□□□ -0.64
GMDS-204	ENST00000476972	TIMM17B	O60830	172 aa		11.07	□□□□□ -0.64
GMDS-204	ENST00000476972	C20orf202	A1L168	122 aa		11.06	□□□□□ -0.64
GMDS-204	ENST00000476972	TRAV23DV6	A0A075B6W5	121 aa		11.05	□□□□□ -0.64

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