RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 OR13C6PQ8NH95 151 aa12.81□□□□□ -0.36
SYF2-204ENST00000476231 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
SYF2-204ENST00000476231 A0A087WYN8 130 aa12.8□□□□□ -0.36
SYF2-204ENST00000476231 NHLRC4P0CG21 123 aaPredicted RBP12.8□□□□□ -0.36
SYF2-204ENST00000476231 DNAH10OSP0CZ25 163 aa12.79□□□□□ -0.36
SYF2-204ENST00000476231 TMEM126AQ9H061 195 aa12.79□□□□□ -0.36
SYF2-204ENST00000476231 Q9HAA7 133 aa12.78□□□□□ -0.36
SYF2-204ENST00000476231 LINC00588Q9Y4M8 146 aa12.78□□□□□ -0.36
SYF2-204ENST00000476231 GVQW2A0A096LPI5 108 aaPredicted RBP12.77□□□□□ -0.37
SYF2-204ENST00000476231 SPAG11BQ08648 103 aa12.77□□□□□ -0.37
SYF2-204ENST00000476231 SDIM1Q6ZPB5 146 aa12.76□□□□□ -0.37
SYF2-204ENST00000476231 OBSCN-AS1Q96MR7 158 aa12.76□□□□□ -0.37
SYF2-204ENST00000476231 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
SYF2-204ENST00000476231 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
SYF2-204ENST00000476231 LECT2O14960 151 aa12.74□□□□□ -0.37
SYF2-204ENST00000476231 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
SYF2-204ENST00000476231 KRTAP21-3Q3LHN1 58 aa12.73□□□□□ -0.37
SYF2-204ENST00000476231 IMUPQ9GZP8 106 aa12.73□□□□□ -0.37
SYF2-204ENST00000476231 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
SYF2-204ENST00000476231 UPK3BQ9BT76 320 aa12.72□□□□□ -0.37
SYF2-204ENST00000476231 C1orf43Q9BWL3 253 aa12.72□□□□□ -0.37
SYF2-204ENST00000476231 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
SYF2-204ENST00000476231 LINC00643Q86TS7 51 aa12.71□□□□□ -0.37
SYF2-204ENST00000476231 C9orf116Q5BN46 136 aaPredicted RBP12.7□□□□□ -0.38
SYF2-204ENST00000476231 TTC32Q5I0X7 151 aa12.7□□□□□ -0.38
SYF2-204ENST00000476231 ORMDL1Q9P0S3 153 aa12.7□□□□□ -0.38
SYF2-204ENST00000476231 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
SYF2-204ENST00000476231 C10orf25Q5T742 122 aa12.69□□□□□ -0.38
SYF2-204ENST00000476231 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
SYF2-204ENST00000476231 NDUFV3P56181 108 aaKnown RBP12.69□□□□□ -0.38
SYF2-204ENST00000476231 PRR3P79522 188 aaKnown RBP12.68□□□□□ -0.38
SYF2-204ENST00000476231 C6orf223Q8N319 242 aa12.68□□□□□ -0.38
SYF2-204ENST00000476231 Q8N814 137 aa12.68□□□□□ -0.38
SYF2-204ENST00000476231 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
SYF2-204ENST00000476231 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
SYF2-204ENST00000476231 S100A7L2Q5SY68 101 aa12.65□□□□□ -0.38
SYF2-204ENST00000476231 TMEM256-PLSCR3K7ERE1 68 aa12.64□□□□□ -0.39
SYF2-204ENST00000476231 Q8NDZ9 215 aa12.64□□□□□ -0.39
SYF2-204ENST00000476231 LINC00526Q96FQ7 95 aa12.64□□□□□ -0.39
SYF2-204ENST00000476231 ZNF561-AS1K7EIQ3 104 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 GAGE2AQ6NT46 116 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 F8WDY8 70 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 JMJD7-PLA2G4BH0Y9G9 81 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 SMCR5Q8TEV8 140 aa12.63□□□□□ -0.39
SYF2-204ENST00000476231 DYNC2H1Q8NCM8 4307 aaKnown RBP12.63□□□□□ -0.39
SYF2-204ENST00000476231 NUPR2A6NF83 97 aa12.62□□□□□ -0.39
SYF2-204ENST00000476231 NCR3O14931 201 aa12.62□□□□□ -0.39
SYF2-204ENST00000476231 C6orf48Q9UBA6 75 aa12.62□□□□□ -0.39
SYF2-204ENST00000476231 STAB2Q8WWQ8 2551 aa12.62□□□□□ -0.39
SYF2-204ENST00000476231 C6orf99Q4VX62 202 aa12.61□□□□□ -0.39
SYF2-204ENST00000476231 RMI2Q96E14 147 aa12.61□□□□□ -0.39
SYF2-204ENST00000476231 LINC00575Q6W349 94 aa12.61□□□□□ -0.39
SYF2-204ENST00000476231 C2orf48Q96LS8 159 aa12.61□□□□□ -0.39
SYF2-204ENST00000476231 SLPIP03973 132 aa12.6□□□□□ -0.39
SYF2-204ENST00000476231 HIGD2BQ4VC39 106 aa12.6□□□□□ -0.39
SYF2-204ENST00000476231 C9orf129Q5T035 196 aaKnown RBP12.6□□□□□ -0.39
SYF2-204ENST00000476231 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
SYF2-204ENST00000476231 H3BQ85 93 aa12.59□□□□□ -0.39
SYF2-204ENST00000476231 CAMK2N2Q96S95 79 aa12.59□□□□□ -0.39
SYF2-204ENST00000476231 UBE2DNLQ8IWF7 75 aa12.58□□□□□ -0.4
SYF2-204ENST00000476231 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
SYF2-204ENST00000476231 CCKP06307 115 aa12.55□□□□□ -0.4
SYF2-204ENST00000476231 hADV29S1A0JD25 119 aa12.54□□□□□ -0.4
SYF2-204ENST00000476231 RPL18AQ02543 176 aaKnown RBP12.54□□□□□ -0.4
SYF2-204ENST00000476231 MEGF8Q7Z7M0 2845 aa12.54□□□□□ -0.4
SYF2-204ENST00000476231 PRKDCP78527 4128 aaKnown RBP12.54□□□□□ -0.4
SYF2-204ENST00000476231 TRBV7-6A0A0J9YX20 115 aa12.53□□□□□ -0.4
SYF2-204ENST00000476231 Q6ZRU5 148 aa12.53□□□□□ -0.4
SYF2-204ENST00000476231 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
SYF2-204ENST00000476231 Q6JHZ5 121 aa12.51□□□□□ -0.41
SYF2-204ENST00000476231 TRAV23DV6A0A075B6W5 121 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 TRBV10-3A0A0K0K1G6 114 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 VPREB1P12018 145 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 LINC00846Q9NV44 126 aa12.5□□□□□ -0.41
SYF2-204ENST00000476231 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 XAGE1AQ9HD64 81 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 M0R378 163 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 GHRHP01286 108 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 CASC10Q5T4H9 136 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 KRTAP1-5Q9BYS1 174 aa12.49□□□□□ -0.41
SYF2-204ENST00000476231 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
SYF2-204ENST00000476231 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
SYF2-204ENST00000476231 FAM236AA0A1B0GUQ0 79 aa12.46□□□□□ -0.41
SYF2-204ENST00000476231 FAM236BA0A1B0GV22 79 aa12.46□□□□□ -0.41
SYF2-204ENST00000476231 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
SYF2-204ENST00000476231 CSMD3Q7Z407 3707 aa12.46□□□□□ -0.42
SYF2-204ENST00000476231 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
SYF2-204ENST00000476231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.45□□□□□ -0.42
SYF2-204ENST00000476231 ELOF1P60002 83 aaKnown RBP12.44□□□□□ -0.42
SYF2-204ENST00000476231 PDE6GP18545 87 aa12.43□□□□□ -0.42
SYF2-204ENST00000476231 COX7BP24311 80 aa12.43□□□□□ -0.42
SYF2-204ENST00000476231 RBM3P98179 157 aaKnown RBP12.43□□□□□ -0.42
SYF2-204ENST00000476231 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
SYF2-204ENST00000476231 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
SYF2-204ENST00000476231 CCDC179H3BU77 68 aa12.41□□□□□ -0.42
SYF2-204ENST00000476231 LYSTQ99698 3801 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 1123.7 ms