RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 WNK2Q9Y3S1 2297 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 IGKV3-20P01619 116 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 SLPIP03973 132 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 RNASE3P12724 160 aaKnown RBP2.46□□□□□ -2.02
LSM2-211ENST00000475835 LINC00158P58513 81 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 LINC00575Q6W349 94 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 USMG5Q96IX5 58 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 RHPN1-AS1Q9BWJ2 59 aa2.46□□□□□ -2.02
LSM2-211ENST00000475835 UNC80Q8N2C7 3258 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 APC2O95996 2303 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 DEFB131BA0A096LNP1 70 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 LINC00959A0A1B0GUT2 108 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 M0QY20 66 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 DEFB1P60022 68 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 COX17Q14061 63 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 LY6EQ16553 131 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 DEFB113Q30KQ7 82 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 DEFB104AQ8WTQ1 72 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 CDKN2A-AS1Q9UH64 79 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 SPTBN2O15020 2390 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 MED13LQ71F56 2210 aa2.45□□□□□ -2.02
LSM2-211ENST00000475835 CEP250Q9BV73 2442 aa2.44□□□□□ -2.02
LSM2-211ENST00000475835 A0A1B0GVX0 72 aa2.44□□□□□ -2.02
LSM2-211ENST00000475835 ZNF861PO60384 105 aa2.44□□□□□ -2.02
LSM2-211ENST00000475835 CDH23Q9H251 3354 aa2.44□□□□□ -2.02
LSM2-211ENST00000475835 OTOGLQ3ZCN5 2332 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 ABCA4P78363 2273 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 TPRP12270 2363 aaKnown RBP2.43□□□□□ -2.02
LSM2-211ENST00000475835 A0A096LNT2 108 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 H3BUX3 64 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 M0R2N4 97 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 PLA2G2AP14555 144 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 C10orf25Q5T742 122 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 BRD3OSQ6XYD6 125 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 DHRS4-AS1Q9P1J3 65 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 ACACAQ13085 2346 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 ANKHD1Q8IWZ3 2542 aaKnown RBP2.43□□□□□ -2.02
LSM2-211ENST00000475835 LAMA1P25391 3075 aa2.43□□□□□ -2.02
LSM2-211ENST00000475835 TLX1NBP0CAT3 122 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 Q5W150 140 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 CIRBP-AS1Q8TBR5 109 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 DNAH14Q0VDD8 3507 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 LAMA3Q16787 3333 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 TRIOO75962 3097 aa2.42□□□□□ -2.02
LSM2-211ENST00000475835 CNOT1A5YKK6 2376 aaKnown RBP2.42□□□□□ -2.02
LSM2-211ENST00000475835 IGKV2D-24A0A075B6R9 120 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 IGLV1-40P01703 118 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 HTN1P15515 57 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 Q8IZM0 81 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 ABCA2Q9BZC7 2435 aa2.41□□□□□ -2.02
LSM2-211ENST00000475835 SORL1Q92673 2214 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 IGKV3OR2-268A0A0C4DH90 116 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 A8MUU9 505 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 PANO1I0J062 215 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 INSP01308 110 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 Q8N9L7 120 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 CCL19Q99731 98 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 DOPEY2Q9Y3R5 2298 aa2.4□□□□□ -2.03
LSM2-211ENST00000475835 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 A0A1B0GU69 56 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 A0A1W2PPR1 153 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 RNASE1P07998 156 aaKnown RBP2.39□□□□□ -2.03
LSM2-211ENST00000475835 DEFB131AP59861 70 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 CACNA1HO95180 2353 aa2.39□□□□□ -2.03
LSM2-211ENST00000475835 SPTBN1Q01082 2364 aaKnown RBP2.39□□□□□ -2.03
LSM2-211ENST00000475835 RANBP2P49792 3224 aaKnown RBP2.39□□□□□ -2.03
LSM2-211ENST00000475835 EP300Q09472 2414 aaPredicted RBP2.38□□□□□ -2.03
LSM2-211ENST00000475835 IGLV5-48A0A075B6I7 105 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 KRTAP23-1A1A580 65 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 PRB2P02812 416 aaPredicted RBP2.38□□□□□ -2.03
LSM2-211ENST00000475835 PRB1P04280 392 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 MAP1BP46821 2468 aaKnown RBP2.38□□□□□ -2.03
LSM2-211ENST00000475835 PROK1P58294 105 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 PIEZO2Q9H5I5 2752 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 SZT2Q5T011 3432 aa2.38□□□□□ -2.03
LSM2-211ENST00000475835 CACNA1BQ00975 2339 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 ANKRD11Q6UB99 2663 aaPredicted RBP2.37□□□□□ -2.03
LSM2-211ENST00000475835 HRES1P13985 223 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 SLURP1P55000 103 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 DSCR10P59022 87 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 KRTAP15-1Q3LI76 137 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 C4orf3Q8WVX3 66 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 LINC00472Q9H8W2 130 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 TP53AIP1Q9HCN2 124 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 TOMM7Q9P0U1 55 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 COL6A6A6NMZ7 2263 aa2.37□□□□□ -2.03
LSM2-211ENST00000475835 XIRP2A4UGR9 3374 aa2.36□□□□□ -2.03
LSM2-211ENST00000475835 PRRC2CQ9Y520 2896 aaKnown RBP2.36□□□□□ -2.03
LSM2-211ENST00000475835 PTPRZ1P23471 2315 aaPredicted RBP2.36□□□□□ -2.03
LSM2-211ENST00000475835 BDP1A6H8Y1 2624 aa2.36□□□□□ -2.03
LSM2-211ENST00000475835 A8MTW9 85 aa2.36□□□□□ -2.03
LSM2-211ENST00000475835 KRTAP29-1A8MX34 341 aaPredicted RBP2.36□□□□□ -2.03
LSM2-211ENST00000475835 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
LSM2-211ENST00000475835 COX6A2Q02221 97 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms