RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
SCAF11-206ENST00000474828 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
SCAF11-206ENST00000474828 S100A6P06703 90 aa10.48□□□□□ -0.73
SCAF11-206ENST00000474828 PFN2P35080 140 aa10.48□□□□□ -0.73
SCAF11-206ENST00000474828 AKR1D1P51857 326 aa10.48□□□□□ -0.73
SCAF11-206ENST00000474828 FAM19A5Q7Z5A7 132 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-206ENST00000474828 M0QXV9 152 aa10.47□□□□□ -0.73
SCAF11-206ENST00000474828 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
SCAF11-206ENST00000474828 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
SCAF11-206ENST00000474828 C22orf24Q9Y442 160 aa10.47□□□□□ -0.73
SCAF11-206ENST00000474828 C20orf202A1L168 122 aa10.46□□□□□ -0.73
SCAF11-206ENST00000474828 SNRPEP62304 92 aaKnown RBP10.46□□□□□ -0.73
SCAF11-206ENST00000474828 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
SCAF11-206ENST00000474828 S100A2P29034 98 aa10.45□□□□□ -0.74
SCAF11-206ENST00000474828 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
SCAF11-206ENST00000474828 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
SCAF11-206ENST00000474828 SMIM13P0DJ93 91 aa10.44□□□□□ -0.74
SCAF11-206ENST00000474828 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCAF11-206ENST00000474828 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
SCAF11-206ENST00000474828 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
SCAF11-206ENST00000474828 VPREB1P12018 145 aa10.43□□□□□ -0.74
SCAF11-206ENST00000474828 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
SCAF11-206ENST00000474828 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
SCAF11-206ENST00000474828 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
SCAF11-206ENST00000474828 IGKV2D-26A0A0A0MRZ7 120 aa10.42□□□□□ -0.74
SCAF11-206ENST00000474828 LINC00158P58513 81 aa10.42□□□□□ -0.74
SCAF11-206ENST00000474828 MRPL55Q7Z7F7 128 aaKnown RBP10.42□□□□□ -0.74
SCAF11-206ENST00000474828 Q8NDZ9 215 aa10.42□□□□□ -0.74
SCAF11-206ENST00000474828 HERC1Q15751 4861 aa10.41□□□□□ -0.74
SCAF11-206ENST00000474828 A0A0J9YXY3 114 aa10.4□□□□□ -0.74
SCAF11-206ENST00000474828 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
SCAF11-206ENST00000474828 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
SCAF11-206ENST00000474828 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-206ENST00000474828 RPL24P83731 157 aaKnown RBP10.39□□□□□ -0.75
SCAF11-206ENST00000474828 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
SCAF11-206ENST00000474828 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
SCAF11-206ENST00000474828 LITAFQ99732 161 aa10.38□□□□□ -0.75
SCAF11-206ENST00000474828 A0A0U1RRA0 63 aa10.37□□□□□ -0.75
SCAF11-206ENST00000474828 KRTAP29-1A8MX34 341 aaPredicted RBP10.37□□□□□ -0.75
SCAF11-206ENST00000474828 TIMM17BO60830 172 aa10.37□□□□□ -0.75
SCAF11-206ENST00000474828 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
SCAF11-206ENST00000474828 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
SCAF11-206ENST00000474828 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
SCAF11-206ENST00000474828 OXTP01178 125 aa10.35□□□□□ -0.75
SCAF11-206ENST00000474828 UBE2BP63146 152 aa10.35□□□□□ -0.75
SCAF11-206ENST00000474828 C1orf137Q5JT78 98 aa10.35□□□□□ -0.75
SCAF11-206ENST00000474828 ADAMTSL4-AS1Q5T5F5 129 aa10.35□□□□□ -0.75
SCAF11-206ENST00000474828 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
SCAF11-206ENST00000474828 IGLV1-50A0A075B6I6 118 aa10.34□□□□□ -0.75
SCAF11-206ENST00000474828 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
SCAF11-206ENST00000474828 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
SCAF11-206ENST00000474828 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
SCAF11-206ENST00000474828 DAND5Q8N907 189 aa10.32□□□□□ -0.76
SCAF11-206ENST00000474828 M0R378 163 aa10.31□□□□□ -0.76
SCAF11-206ENST00000474828 NDUFC2O95298 119 aa10.31□□□□□ -0.76
SCAF11-206ENST00000474828 SOSTDC1Q6X4U4 206 aa10.31□□□□□ -0.76
SCAF11-206ENST00000474828 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
SCAF11-206ENST00000474828 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
SCAF11-206ENST00000474828 RPL37AP8A6NKH3 93 aa10.3□□□□□ -0.76
SCAF11-206ENST00000474828 EIF4EBP3O60516 100 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-206ENST00000474828 BCE1O60756 84 aa10.3□□□□□ -0.76
SCAF11-206ENST00000474828 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
SCAF11-206ENST00000474828 GAGE10A6NGK3 116 aa10.29□□□□□ -0.76
SCAF11-206ENST00000474828 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SCAF11-206ENST00000474828 ZNF861PO60384 105 aa10.28□□□□□ -0.76
SCAF11-206ENST00000474828 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.77
SCAF11-206ENST00000474828 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
SCAF11-206ENST00000474828 TNXBP22105 4242 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 H0Y9J4 135 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 LORP23490 312 aaPredicted RBP10.26□□□□□ -0.77
SCAF11-206ENST00000474828 JOSD1Q15040 202 aaPredicted RBP10.26□□□□□ -0.77
SCAF11-206ENST00000474828 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 DIRC1Q969H9 104 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 LINC01600Q96MT4 127 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
SCAF11-206ENST00000474828 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
SCAF11-206ENST00000474828 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
SCAF11-206ENST00000474828 SPRR1AP35321 89 aa10.25□□□□□ -0.77
SCAF11-206ENST00000474828 Q6ZVH6 145 aa10.25□□□□□ -0.77
SCAF11-206ENST00000474828 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
SCAF11-206ENST00000474828 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
SCAF11-206ENST00000474828 REG3GQ6UW15 175 aa10.24□□□□□ -0.77
SCAF11-206ENST00000474828 MIEN1Q9BRT3 115 aa10.24□□□□□ -0.77
SCAF11-206ENST00000474828 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-206ENST00000474828 PRYO14603 147 aa10.22□□□□□ -0.77
SCAF11-206ENST00000474828 NCR3O14931 201 aa10.22□□□□□ -0.77
SCAF11-206ENST00000474828 IGLV6-57P01721 117 aa10.22□□□□□ -0.77
SCAF11-206ENST00000474828 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
SCAF11-206ENST00000474828 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
SCAF11-206ENST00000474828 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.77
SCAF11-206ENST00000474828 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.77
SCAF11-206ENST00000474828 IFITM1P13164 125 aa10.21□□□□□ -0.77
SCAF11-206ENST00000474828 DLEU1O43261 78 aa10.2□□□□□ -0.78
SCAF11-206ENST00000474828 KRTAP10-8P60410 259 aa10.2□□□□□ -0.78
SCAF11-206ENST00000474828 LINC00337Q8N6G1 96 aa10.2□□□□□ -0.78
SCAF11-206ENST00000474828 COX8AP10176 69 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms