RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
APP-215ENST00000474136 LPAP08519 4548 aa12.63□□□□□ -0.39
APP-215ENST00000474136 PRR3P79522 188 aaKnown RBP12.63□□□□□ -0.39
APP-215ENST00000474136 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
APP-215ENST00000474136 C14orf144Q96I85 54 aa12.63□□□□□ -0.39
APP-215ENST00000474136 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
APP-215ENST00000474136 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
APP-215ENST00000474136 SYCNQ0VAF6 134 aa12.62□□□□□ -0.39
APP-215ENST00000474136 TSTD3H0UI37 97 aa12.62□□□□□ -0.39
APP-215ENST00000474136 RNF151Q2KHN1 245 aa12.62□□□□□ -0.39
APP-215ENST00000474136 COX17Q14061 63 aa12.61□□□□□ -0.39
APP-215ENST00000474136 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
APP-215ENST00000474136 SCGB1D4Q6XE38 83 aa12.61□□□□□ -0.39
APP-215ENST00000474136 UQCR10Q9UDW1 63 aa12.61□□□□□ -0.39
APP-215ENST00000474136 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
APP-215ENST00000474136 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
APP-215ENST00000474136 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
APP-215ENST00000474136 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
APP-215ENST00000474136 PKIGQ9Y2B9 76 aa12.59□□□□□ -0.39
APP-215ENST00000474136 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
APP-215ENST00000474136 TIMM17BO60830 172 aa12.58□□□□□ -0.4
APP-215ENST00000474136 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
APP-215ENST00000474136 MIEN1Q9BRT3 115 aa12.57□□□□□ -0.4
APP-215ENST00000474136 IGKV2-24A0A0C4DH68 120 aa12.56□□□□□ -0.4
APP-215ENST00000474136 ERG28Q9UKR5 140 aa12.56□□□□□ -0.4
APP-215ENST00000474136 TMEM238C9JI98 176 aa12.55□□□□□ -0.4
APP-215ENST00000474136 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
APP-215ENST00000474136 C10orf25Q5T742 122 aa12.54□□□□□ -0.4
APP-215ENST00000474136 Q6ZVH6 145 aa12.54□□□□□ -0.4
APP-215ENST00000474136 PRO1933Q9H354 126 aa12.54□□□□□ -0.4
APP-215ENST00000474136 C6orf48Q9UBA6 75 aa12.54□□□□□ -0.4
APP-215ENST00000474136 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
APP-215ENST00000474136 SPINK6Q6UWN8 80 aa12.53□□□□□ -0.4
APP-215ENST00000474136 LINC00158P58513 81 aa12.52□□□□□ -0.41
APP-215ENST00000474136 COPS9Q8WXC6 57 aa12.52□□□□□ -0.41
APP-215ENST00000474136 TLX1NBP0CAT3 122 aa12.51□□□□□ -0.41
APP-215ENST00000474136 PFN2P35080 140 aa12.5□□□□□ -0.41
APP-215ENST00000474136 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
APP-215ENST00000474136 NDUFC2-KCTD14E9PQ53 114 aa12.49□□□□□ -0.41
APP-215ENST00000474136 SMIM13P0DJ93 91 aa12.49□□□□□ -0.41
APP-215ENST00000474136 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
APP-215ENST00000474136 A0A096LNI7 61 aa12.48□□□□□ -0.41
APP-215ENST00000474136 LOC107984640A0A0U1RRK4 108 aa12.48□□□□□ -0.41
APP-215ENST00000474136 SPANXDQ9BXN6 97 aa12.48□□□□□ -0.41
APP-215ENST00000474136 SPANXCQ9NY87 97 aa12.48□□□□□ -0.41
APP-215ENST00000474136 TAL2Q16559 108 aa12.47□□□□□ -0.41
APP-215ENST00000474136 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
APP-215ENST00000474136 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
APP-215ENST00000474136 IFITM1P13164 125 aa12.46□□□□□ -0.41
APP-215ENST00000474136 LITAFQ99732 161 aa12.46□□□□□ -0.41
APP-215ENST00000474136 PTTG1IPP53801 180 aa12.45□□□□□ -0.42
APP-215ENST00000474136 MIR7-3HGQ8N6C7 128 aa12.45□□□□□ -0.42
APP-215ENST00000474136 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
APP-215ENST00000474136 KRTAP9-2Q9BYQ4 174 aa12.45□□□□□ -0.42
APP-215ENST00000474136 PPDPFQ9H3Y8 114 aa12.45□□□□□ -0.42
APP-215ENST00000474136 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
APP-215ENST00000474136 ADAMTSL4-AS1Q5T5F5 129 aa12.44□□□□□ -0.42
APP-215ENST00000474136 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
APP-215ENST00000474136 DDTP30046 118 aa12.42□□□□□ -0.42
APP-215ENST00000474136 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
APP-215ENST00000474136 LOC107984156A0A0G2JMH3 177 aa12.41□□□□□ -0.42
APP-215ENST00000474136 RPL18AQ02543 176 aaKnown RBP12.41□□□□□ -0.42
APP-215ENST00000474136 HSD52Q0P140 79 aa12.41□□□□□ -0.42
APP-215ENST00000474136 Q6ZRP5 223 aa12.41□□□□□ -0.42
APP-215ENST00000474136 ARL17AQ8IVW1 177 aa12.41□□□□□ -0.42
APP-215ENST00000474136 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
APP-215ENST00000474136 MUC2Q02817 5179 aa12.4□□□□□ -0.42
APP-215ENST00000474136 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
APP-215ENST00000474136 LINC00308Q8TCZ7 52 aa12.39□□□□□ -0.43
APP-215ENST00000474136 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
APP-215ENST00000474136 DAND5Q8N907 189 aa12.38□□□□□ -0.43
APP-215ENST00000474136 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
APP-215ENST00000474136 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
APP-215ENST00000474136 M0R143 59 aa12.37□□□□□ -0.43
APP-215ENST00000474136 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
APP-215ENST00000474136 CEND1Q8N111 149 aa12.37□□□□□ -0.43
APP-215ENST00000474136 TMEM238LA0A1B0GVL6 79 aa12.36□□□□□ -0.43
APP-215ENST00000474136 A6NJY4 79 aa12.36□□□□□ -0.43
APP-215ENST00000474136 CTAG1AP78358 180 aa12.36□□□□□ -0.43
APP-215ENST00000474136 NDUFC2O95298 119 aa12.35□□□□□ -0.43
APP-215ENST00000474136 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
APP-215ENST00000474136 NPC2P61916 151 aa12.33□□□□□ -0.44
APP-215ENST00000474136 PCP4L1A6NKN8 68 aa12.31□□□□□ -0.44
APP-215ENST00000474136 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
APP-215ENST00000474136 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
APP-215ENST00000474136 A4D1N5 150 aa12.29□□□□□ -0.44
APP-215ENST00000474136 PRR26Q8N8Z3 221 aa12.29□□□□□ -0.44
APP-215ENST00000474136 PSORS1C2Q9UIG4 136 aa12.28□□□□□ -0.44
APP-215ENST00000474136 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
APP-215ENST00000474136 A0A1W2PNN7 141 aa12.27□□□□□ -0.45
APP-215ENST00000474136 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.45
APP-215ENST00000474136 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
APP-215ENST00000474136 HINT1P49773 126 aaPredicted RBP12.26□□□□□ -0.45
APP-215ENST00000474136 NKAPP1Q8N9T2 125 aa12.26□□□□□ -0.45
APP-215ENST00000474136 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
APP-215ENST00000474136 A6NDN8 102 aa12.25□□□□□ -0.45
APP-215ENST00000474136 VPREB1P12018 145 aa12.25□□□□□ -0.45
APP-215ENST00000474136 FXYD2P54710 66 aa12.25□□□□□ -0.45
APP-215ENST00000474136 TRAV13-2A0A0B4J235 113 aa12.24□□□□□ -0.45
APP-215ENST00000474136 FAT4Q6V0I7 4981 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms