RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FXYD2P54710 66 aa6.67□□□□□ -1.34
PRPF38A-202ENST00000474048 Q6ZRP5 223 aa6.67□□□□□ -1.34
PRPF38A-202ENST00000474048 LYSTQ99698 3801 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 C16orf90A8MZG2 172 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 SLPIP03973 132 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 COL5A1-AS1Q5SY13 56 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 S100A7L2Q5SY68 101 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
PRPF38A-202ENST00000474048 NDUFC2O95298 119 aa6.65□□□□□ -1.34
PRPF38A-202ENST00000474048 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.35
PRPF38A-202ENST00000474048 A0A0B4J2C4 111 aa6.64□□□□□ -1.35
PRPF38A-202ENST00000474048 NCR3O14931 201 aa6.64□□□□□ -1.35
PRPF38A-202ENST00000474048 SOSTDC1Q6X4U4 206 aa6.64□□□□□ -1.35
PRPF38A-202ENST00000474048 SNHG12Q9BXW3 62 aa6.64□□□□□ -1.35
PRPF38A-202ENST00000474048 PRO1854Q9UHT4 67 aa6.64□□□□□ -1.35
PRPF38A-202ENST00000474048 A0A096LNI7 61 aa6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 H7C2G1 150 aa6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 RPL13AP40429 203 aaKnown RBP6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 LBHQ53QV2 105 aaPredicted RBP6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
PRPF38A-202ENST00000474048 PSMB2P49721 201 aa6.62□□□□□ -1.35
PRPF38A-202ENST00000474048 LINC01620Q4KN68 170 aa6.62□□□□□ -1.35
PRPF38A-202ENST00000474048 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
PRPF38A-202ENST00000474048 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
PRPF38A-202ENST00000474048 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 K7ERJ3 54 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 M0R378 163 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 CFC1P0CG37 223 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 C9orf129Q5T035 196 aaKnown RBP6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
PRPF38A-202ENST00000474048 COX6CP09669 75 aa6.6□□□□□ -1.35
PRPF38A-202ENST00000474048 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
PRPF38A-202ENST00000474048 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
PRPF38A-202ENST00000474048 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 M0QXV9 152 aa6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 VPREB1P12018 145 aa6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 UBE2BP63146 152 aa6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
PRPF38A-202ENST00000474048 CHTF8P0CG12 524 aa6.58□□□□□ -1.36
PRPF38A-202ENST00000474048 SCGB1C2P0DMR2 95 aa6.58□□□□□ -1.36
PRPF38A-202ENST00000474048 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
PRPF38A-202ENST00000474048 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
PRPF38A-202ENST00000474048 GAGE10A6NGK3 116 aa6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 SNCGO76070 127 aa6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 VAMP3Q15836 100 aa6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 SPACA4Q8TDM5 124 aa6.57□□□□□ -1.36
PRPF38A-202ENST00000474048 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 TRAV23DV6A0A075B6W5 121 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 FAM168BA1KXE4 195 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 TSPAN13O95857 204 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 SERTAD4-AS1Q5TG53 156 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 C22orf24Q9Y442 160 aa6.56□□□□□ -1.36
PRPF38A-202ENST00000474048 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
PRPF38A-202ENST00000474048 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
PRPF38A-202ENST00000474048 H3BUT2 72 aa6.55□□□□□ -1.36
PRPF38A-202ENST00000474048 FABP2P12104 132 aa6.55□□□□□ -1.36
PRPF38A-202ENST00000474048 TAX1BP3O14907 124 aa6.54□□□□□ -1.36
PRPF38A-202ENST00000474048 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
PRPF38A-202ENST00000474048 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
PRPF38A-202ENST00000474048 A0A087WYN8 130 aa6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 PRYO14603 147 aa6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 LINC00167Q96N53 147 aa6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
PRPF38A-202ENST00000474048 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 ETDCA0A1B0GVM5 59 aa6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 A0A1W2PNN7 141 aa6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 Q8NDZ9 215 aa6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
PRPF38A-202ENST00000474048 KMT2AQ03164 3969 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 A0A1W2PPM0 123 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 H0YGX0 51 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 TRIAP1O43715 76 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 SLC25A20O43772 301 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 ZNF73O43830 326 aaPredicted RBP6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
PRPF38A-202ENST00000474048 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
PRPF38A-202ENST00000474048 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
PRPF38A-202ENST00000474048 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
PRPF38A-202ENST00000474048 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
PRPF38A-202ENST00000474048 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 PANO1I0J062 215 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 DNAL4O96015 105 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 COX7BP24311 80 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms