RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC25A34Q6PIV7 304 aa8.26□□□□□ -1.09
TPM3-216ENST00000473036 SCGB1D4Q6XE38 83 aa8.26□□□□□ -1.09
TPM3-216ENST00000473036 C12orf57Q99622 126 aa8.26□□□□□ -1.09
TPM3-216ENST00000473036 IGKV2D-26A0A0A0MRZ7 120 aa8.25□□□□□ -1.09
TPM3-216ENST00000473036 TIMM17BO60830 172 aa8.25□□□□□ -1.09
TPM3-216ENST00000473036 PTTG1IPP53801 180 aa8.25□□□□□ -1.09
TPM3-216ENST00000473036 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
TPM3-216ENST00000473036 Q6ZVH6 145 aa8.25□□□□□ -1.09
TPM3-216ENST00000473036 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
TPM3-216ENST00000473036 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 OXTP01178 125 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 Q6ZRP5 223 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 LINC00518Q8N0U6 118 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 LINC00474Q9P2X8 69 aa8.24□□□□□ -1.09
TPM3-216ENST00000473036 TMEM238C9JI98 176 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 TSTD3H0UI37 97 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 TLX1NBP0CAT3 122 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 TSPEAR-AS2P59090 65 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 UQCR10Q9UDW1 63 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 ERG28Q9UKR5 140 aa8.23□□□□□ -1.09
TPM3-216ENST00000473036 A0A0J9YXY3 114 aa8.22□□□□□ -1.09
TPM3-216ENST00000473036 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
TPM3-216ENST00000473036 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
TPM3-216ENST00000473036 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
TPM3-216ENST00000473036 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
TPM3-216ENST00000473036 HNRNPA3P51991 378 aaKnown RBP8.21□□□□□ -1.1
TPM3-216ENST00000473036 LINC00158P58513 81 aa8.21□□□□□ -1.1
TPM3-216ENST00000473036 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
TPM3-216ENST00000473036 C14orf144Q96I85 54 aa8.21□□□□□ -1.1
TPM3-216ENST00000473036 FAM168BA1KXE4 195 aa8.2□□□□□ -1.1
TPM3-216ENST00000473036 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
TPM3-216ENST00000473036 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
TPM3-216ENST00000473036 IFITM1P13164 125 aa8.19□□□□□ -1.1
TPM3-216ENST00000473036 PFN2P35080 140 aa8.19□□□□□ -1.1
TPM3-216ENST00000473036 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
TPM3-216ENST00000473036 MIEN1Q9BRT3 115 aa8.19□□□□□ -1.1
TPM3-216ENST00000473036 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
TPM3-216ENST00000473036 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
TPM3-216ENST00000473036 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
TPM3-216ENST00000473036 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
TPM3-216ENST00000473036 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
TPM3-216ENST00000473036 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
TPM3-216ENST00000473036 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
TPM3-216ENST00000473036 TAL2Q16559 108 aa8.17□□□□□ -1.1
TPM3-216ENST00000473036 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
TPM3-216ENST00000473036 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
TPM3-216ENST00000473036 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
TPM3-216ENST00000473036 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
TPM3-216ENST00000473036 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
TPM3-216ENST00000473036 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
TPM3-216ENST00000473036 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
TPM3-216ENST00000473036 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
TPM3-216ENST00000473036 HIST1H4GQ99525 98 aa8.15□□□□□ -1.1
TPM3-216ENST00000473036 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
TPM3-216ENST00000473036 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
TPM3-216ENST00000473036 LITAFQ99732 161 aa8.13□□□□□ -1.11
TPM3-216ENST00000473036 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
TPM3-216ENST00000473036 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
TPM3-216ENST00000473036 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
TPM3-216ENST00000473036 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
TPM3-216ENST00000473036 A6NJY4 79 aa8.12□□□□□ -1.11
TPM3-216ENST00000473036 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
TPM3-216ENST00000473036 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
TPM3-216ENST00000473036 NDUFC2O95298 119 aa8.11□□□□□ -1.11
TPM3-216ENST00000473036 PRR3P79522 188 aaKnown RBP8.11□□□□□ -1.11
TPM3-216ENST00000473036 HSD52Q0P140 79 aa8.11□□□□□ -1.11
TPM3-216ENST00000473036 ADAMTSL4-AS1Q5T5F5 129 aa8.11□□□□□ -1.11
TPM3-216ENST00000473036 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
TPM3-216ENST00000473036 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
TPM3-216ENST00000473036 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
TPM3-216ENST00000473036 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
TPM3-216ENST00000473036 M0R143 59 aa8.08□□□□□ -1.12
TPM3-216ENST00000473036 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
TPM3-216ENST00000473036 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
TPM3-216ENST00000473036 Q8NDZ9 215 aa8.08□□□□□ -1.12
TPM3-216ENST00000473036 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
TPM3-216ENST00000473036 TRBV10-2A0A0K0K1G8 114 aa8.07□□□□□ -1.12
TPM3-216ENST00000473036 DDTP30046 118 aa8.07□□□□□ -1.12
TPM3-216ENST00000473036 CEND1Q8N111 149 aa8.07□□□□□ -1.12
TPM3-216ENST00000473036 DAND5Q8N907 189 aa8.07□□□□□ -1.12
TPM3-216ENST00000473036 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
TPM3-216ENST00000473036 M0QXV9 152 aa8.06□□□□□ -1.12
TPM3-216ENST00000473036 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
TPM3-216ENST00000473036 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
TPM3-216ENST00000473036 TRAV13-2A0A0B4J235 113 aa8.04□□□□□ -1.12
TPM3-216ENST00000473036 M0R378 163 aa8.04□□□□□ -1.12
TPM3-216ENST00000473036 NPC2P61916 151 aa8.03□□□□□ -1.12
TPM3-216ENST00000473036 CTAG1AP78358 180 aa8.03□□□□□ -1.12
TPM3-216ENST00000473036 A6NDN8 102 aa8.02□□□□□ -1.13
TPM3-216ENST00000473036 VPREB1P12018 145 aa8.02□□□□□ -1.13
TPM3-216ENST00000473036 TMEM126AQ9H061 195 aa8.02□□□□□ -1.13
TPM3-216ENST00000473036 A4D1N5 150 aa8.01□□□□□ -1.13
TPM3-216ENST00000473036 C1orf137Q5JT78 98 aa8.01□□□□□ -1.13
TPM3-216ENST00000473036 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
TPM3-216ENST00000473036 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
TPM3-216ENST00000473036 MRPL55Q7Z7F7 128 aaKnown RBP8.01□□□□□ -1.13
TPM3-216ENST00000473036 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms