RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 C9orf116Q5BN46 136 aaPredicted RBP5.78□□□□□ -1.48
SMC4-213ENST00000472282 HIST3H2BBQ8N257 126 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 A0A087WYN8 130 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 S100A2P29034 98 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 PTTG1IPP53801 180 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 KRTDAPP60985 99 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
SMC4-213ENST00000472282 TLX1NBP0CAT3 122 aa5.76□□□□□ -1.49
SMC4-213ENST00000472282 Q6ZRP5 223 aa5.76□□□□□ -1.49
SMC4-213ENST00000472282 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
SMC4-213ENST00000472282 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
SMC4-213ENST00000472282 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 RPL37AP61513 92 aaKnown RBP5.75□□□□□ -1.49
SMC4-213ENST00000472282 HERVK_113P61574 105 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
SMC4-213ENST00000472282 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 STPG4Q8N801 248 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 LINC00474Q9P2X8 69 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
SMC4-213ENST00000472282 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
SMC4-213ENST00000472282 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
SMC4-213ENST00000472282 PLAC8Q9NZF1 115 aa5.74□□□□□ -1.49
SMC4-213ENST00000472282 C20orf202A1L168 122 aa5.73□□□□□ -1.49
SMC4-213ENST00000472282 C5orf52A6NGY3 159 aa5.73□□□□□ -1.49
SMC4-213ENST00000472282 LEPROTO15243 131 aa5.73□□□□□ -1.49
SMC4-213ENST00000472282 C21orf62-AS1Q17RA5 79 aa5.73□□□□□ -1.49
SMC4-213ENST00000472282 PFN2P35080 140 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
SMC4-213ENST00000472282 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 XAGE1AQ9HD64 81 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 ERG28Q9UKR5 140 aa5.72□□□□□ -1.49
SMC4-213ENST00000472282 A0A1W2PNN7 141 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 J3QQQ9 107 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 OXTP01178 125 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.5
SMC4-213ENST00000472282 ATOH7Q8N100 152 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
SMC4-213ENST00000472282 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
SMC4-213ENST00000472282 E9PLD3 99 aa5.7□□□□□ -1.5
SMC4-213ENST00000472282 LGALS3P17931 250 aaKnown RBP5.7□□□□□ -1.5
SMC4-213ENST00000472282 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
SMC4-213ENST00000472282 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
SMC4-213ENST00000472282 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
SMC4-213ENST00000472282 HERV-K104P63124 156 aa5.69□□□□□ -1.5
SMC4-213ENST00000472282 COX17Q14061 63 aa5.69□□□□□ -1.5
SMC4-213ENST00000472282 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
SMC4-213ENST00000472282 IGKV2D-26A0A0A0MRZ7 120 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 M0QXV9 152 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 NMUP48645 174 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 AKR1D1P51857 326 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 LINC00158P58513 81 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 SERTAD4-AS1Q5TG53 156 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
SMC4-213ENST00000472282 SND1-IT1Q9HBX3 110 aa5.67□□□□□ -1.5
SMC4-213ENST00000472282 SCGB1D1O95968 90 aa5.66□□□□□ -1.5
SMC4-213ENST00000472282 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
SMC4-213ENST00000472282 TTTY13Q9BZ97 58 aa5.66□□□□□ -1.5
SMC4-213ENST00000472282 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
SMC4-213ENST00000472282 ZNF815PA8K554 130 aa5.65□□□□□ -1.5
SMC4-213ENST00000472282 LINC00587B1AMM8 73 aa5.65□□□□□ -1.5
SMC4-213ENST00000472282 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
SMC4-213ENST00000472282 UBE2BP63146 152 aa5.64□□□□□ -1.51
SMC4-213ENST00000472282 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
SMC4-213ENST00000472282 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.64□□□□□ -1.51
SMC4-213ENST00000472282 DAND5Q8N907 189 aa5.64□□□□□ -1.51
SMC4-213ENST00000472282 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
SMC4-213ENST00000472282 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 HSBP1L1C9JCN9 74 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 VPREB1P12018 145 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
SMC4-213ENST00000472282 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 PCP2Q8IVA1 136 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 Q8NDZ9 215 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
SMC4-213ENST00000472282 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
SMC4-213ENST00000472282 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
SMC4-213ENST00000472282 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
SMC4-213ENST00000472282 TNXBP22105 4242 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 NPC2P61916 151 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 RPL24P83731 157 aaKnown RBP5.61□□□□□ -1.51
SMC4-213ENST00000472282 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
SMC4-213ENST00000472282 LBHQ53QV2 105 aaPredicted RBP5.61□□□□□ -1.51
SMC4-213ENST00000472282 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 LITAFQ99732 161 aa5.61□□□□□ -1.51
SMC4-213ENST00000472282 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
SMC4-213ENST00000472282 TIMM17BO60830 172 aa5.6□□□□□ -1.51
SMC4-213ENST00000472282 SOSTDC1Q6X4U4 206 aa5.6□□□□□ -1.51
SMC4-213ENST00000472282 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
SMC4-213ENST00000472282 MIEN1Q9BRT3 115 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms