RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 STAB2Q8WWQ8 2551 aa10.06□□□□□ -0.8
UBXN11-213ENST00000472155 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
UBXN11-213ENST00000472155 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
UBXN11-213ENST00000472155 COX17Q14061 63 aa10.05□□□□□ -0.8
UBXN11-213ENST00000472155 SMCR5Q8TEV8 140 aa10.05□□□□□ -0.8
UBXN11-213ENST00000472155 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
UBXN11-213ENST00000472155 DNAH1Q9P2D7 4330 aa10.05□□□□□ -0.8
UBXN11-213ENST00000472155 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
UBXN11-213ENST00000472155 DNAL4O96015 105 aa10.04□□□□□ -0.8
UBXN11-213ENST00000472155 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
UBXN11-213ENST00000472155 H0YGX0 51 aa10.03□□□□□ -0.8
UBXN11-213ENST00000472155 SNCGO76070 127 aa10.03□□□□□ -0.8
UBXN11-213ENST00000472155 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
UBXN11-213ENST00000472155 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
UBXN11-213ENST00000472155 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
UBXN11-213ENST00000472155 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 NDUFC2O95298 119 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 GAGE2BQ13066 116 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 C6orf99Q4VX62 202 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
UBXN11-213ENST00000472155 TENM2Q9NT68 2774 aa10.01□□□□□ -0.81
UBXN11-213ENST00000472155 CCDC179H3BU77 68 aa10.01□□□□□ -0.81
UBXN11-213ENST00000472155 H3BNG1 76 aa10□□□□□ -0.81
UBXN11-213ENST00000472155 NDUFV3P56181 108 aaKnown RBP10□□□□□ -0.81
UBXN11-213ENST00000472155 C15orf56Q8N910 161 aa10□□□□□ -0.81
UBXN11-213ENST00000472155 GAGE2AQ6NT46 116 aa10□□□□□ -0.81
UBXN11-213ENST00000472155 TMEM126AQ9H061 195 aa10□□□□□ -0.81
UBXN11-213ENST00000472155 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
UBXN11-213ENST00000472155 S100A7L2Q5SY68 101 aa9.99□□□□□ -0.81
UBXN11-213ENST00000472155 Q6ZRU5 148 aa9.98□□□□□ -0.81
UBXN11-213ENST00000472155 Q8N814 137 aa9.97□□□□□ -0.81
UBXN11-213ENST00000472155 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
UBXN11-213ENST00000472155 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.81
UBXN11-213ENST00000472155 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.81
UBXN11-213ENST00000472155 K7EIL1 84 aa9.96□□□□□ -0.82
UBXN11-213ENST00000472155 DNAH9Q9NYC9 4486 aa9.95□□□□□ -0.82
UBXN11-213ENST00000472155 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
UBXN11-213ENST00000472155 GVQW2A0A096LPI5 108 aaPredicted RBP9.94□□□□□ -0.82
UBXN11-213ENST00000472155 CASC10Q5T4H9 136 aa9.94□□□□□ -0.82
UBXN11-213ENST00000472155 ORMDL1Q9P0S3 153 aa9.94□□□□□ -0.82
UBXN11-213ENST00000472155 CSMD3Q7Z407 3707 aa9.94□□□□□ -0.82
UBXN11-213ENST00000472155 OBSCN-AS1Q96MR7 158 aa9.94□□□□□ -0.82
UBXN11-213ENST00000472155 IGLV6-57P01721 117 aa9.93□□□□□ -0.82
UBXN11-213ENST00000472155 DNAH7Q8WXX0 4024 aa9.93□□□□□ -0.82
UBXN11-213ENST00000472155 LINC01556Q5JQF7 62 aa9.93□□□□□ -0.82
UBXN11-213ENST00000472155 C1orf43Q9BWL3 253 aa9.93□□□□□ -0.82
UBXN11-213ENST00000472155 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
UBXN11-213ENST00000472155 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
UBXN11-213ENST00000472155 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
UBXN11-213ENST00000472155 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
UBXN11-213ENST00000472155 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
UBXN11-213ENST00000472155 Q6ZRP5 223 aa9.91□□□□□ -0.82
UBXN11-213ENST00000472155 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
UBXN11-213ENST00000472155 LINC00846Q9NV44 126 aa9.89□□□□□ -0.83
UBXN11-213ENST00000472155 ACYP1P07311 99 aa9.89□□□□□ -0.83
UBXN11-213ENST00000472155 VPREB1P12018 145 aa9.89□□□□□ -0.83
UBXN11-213ENST00000472155 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
UBXN11-213ENST00000472155 Q6Q795 121 aa9.87□□□□□ -0.83
UBXN11-213ENST00000472155 TRAV23DV6A0A075B6W5 121 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 TRBV7-7A0A0K0K1E9 115 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 hADV29S1A0JD25 119 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 Q6ZQY7 126 aa9.86□□□□□ -0.83
UBXN11-213ENST00000472155 LINC00643Q86TS7 51 aa9.85□□□□□ -0.83
UBXN11-213ENST00000472155 MUC7Q8TAX7 377 aa9.84□□□□□ -0.83
UBXN11-213ENST00000472155 A0A1B0GX51 115 aa9.84□□□□□ -0.83
UBXN11-213ENST00000472155 M0R2N4 97 aa9.84□□□□□ -0.83
UBXN11-213ENST00000472155 ZNF73O43830 326 aaPredicted RBP9.84□□□□□ -0.83
UBXN11-213ENST00000472155 PLECQ15149 4684 aaKnown RBP9.83□□□□□ -0.84
UBXN11-213ENST00000472155 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
UBXN11-213ENST00000472155 DIRC1Q969H9 104 aa9.82□□□□□ -0.84
UBXN11-213ENST00000472155 FAM168BA1KXE4 195 aa9.81□□□□□ -0.84
UBXN11-213ENST00000472155 CCKP06307 115 aa9.81□□□□□ -0.84
UBXN11-213ENST00000472155 USP17L23D6RBM5 183 aa9.8□□□□□ -0.84
UBXN11-213ENST00000472155 MDFIQ99750 246 aa9.8□□□□□ -0.84
UBXN11-213ENST00000472155 PRKDCP78527 4128 aaKnown RBP9.78□□□□□ -0.84
UBXN11-213ENST00000472155 M0R378 163 aa9.78□□□□□ -0.84
UBXN11-213ENST00000472155 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
UBXN11-213ENST00000472155 A0A087WVE0 104 aa9.78□□□□□ -0.84
UBXN11-213ENST00000472155 COX7BP24311 80 aa9.78□□□□□ -0.84
UBXN11-213ENST00000472155 ELOF1P60002 83 aaKnown RBP9.78□□□□□ -0.84
UBXN11-213ENST00000472155 KRTAP1-5Q9BYS1 174 aa9.78□□□□□ -0.84
UBXN11-213ENST00000472155 JMJD7-PLA2G4BH0Y9G9 81 aa9.77□□□□□ -0.85
UBXN11-213ENST00000472155 DYNC2H1Q8NCM8 4307 aaKnown RBP9.76□□□□□ -0.85
UBXN11-213ENST00000472155 KRTAP7-1Q8IUC3 87 aa9.76□□□□□ -0.85
UBXN11-213ENST00000472155 RPL37AP8A6NKH3 93 aa9.75□□□□□ -0.85
UBXN11-213ENST00000472155 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
UBXN11-213ENST00000472155 RBM3P98179 157 aaKnown RBP9.74□□□□□ -0.85
UBXN11-213ENST00000472155 Q6ZQT0 140 aa9.74□□□□□ -0.85
UBXN11-213ENST00000472155 IMUPQ9GZP8 106 aa9.74□□□□□ -0.85
UBXN11-213ENST00000472155 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms