RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NCOR1O75376 2440 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 TRAV1-2A0A0B4J238 106 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 A0A0J9YY99 117 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 TRBV6-5A0A0K0K1A5 114 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 S100A3P33764 101 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 ST20-AS1Q8NBB2 130 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 ZNF563Q8TA94 476 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 SETD2Q9BYW2 2564 aaPredicted RBP1.68□□□□□ -2.14
CD46-213ENST00000471987 HEATR5BQ9P2D3 2071 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 MED13Q9UHV7 2174 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 NAV3Q8IVL0 2385 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 VPS13AQ96RL7 3174 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 FREM3P0C091 2139 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 MYO7BQ6PIF6 2116 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 KIAA0100Q14667 2235 aaKnown RBP1.67□□□□□ -2.14
CD46-213ENST00000471987 A0A0G2JMZ2 1700 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 LRRC37A2A6NM11 1700 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 LRRC37AA6NMS7 1700 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 A0A0J9YX75 114 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 NUPR2A6NF83 97 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 DNAL4O96015 105 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 CAV3P56539 151 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 SERF2P84101 59 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 SPAG11BQ08648 103 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 PDE6HQ13956 83 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 SPAG11AQ6PDA7 123 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 LYPD6Q86Y78 171 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 CR1P17927 2039 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 COL4A5P29400 1685 aa1.67□□□□□ -2.14
CD46-213ENST00000471987 SEC16AO15027 2179 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 WDR87Q6ZQQ6 2873 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 SPTBP11277 2137 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 PI4KAP42356 2102 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 A0A087WVE0 104 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 A0A1B0GUT8 65 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 SMIM27A0A1W2PRY6 76 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 NDUFB1O75438 58 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 PPP1R17O96001 155 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 KRTAP25-1Q3LHN0 102 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 MRPL36Q9P0J6 103 aaKnown RBP1.66□□□□□ -2.14
CD46-213ENST00000471987 C4AP0C0L4 1744 aa1.66□□□□□ -2.14
CD46-213ENST00000471987 MED12Q93074 2177 aa1.65□□□□□ -2.14
CD46-213ENST00000471987 WDFY3Q8IZQ1 3526 aa1.65□□□□□ -2.14
CD46-213ENST00000471987 MDC1Q14676 2089 aaKnown RBP1.65□□□□□ -2.14
CD46-213ENST00000471987 ABCA2Q9BZC7 2435 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 DIDO1Q9BTC0 2240 aaKnown RBP1.65□□□□□ -2.15
CD46-213ENST00000471987 PLNP26678 52 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 FCER1GP30273 86 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
CD46-213ENST00000471987 SPINT4Q6UDR6 99 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 C9orf163Q8N9P6 203 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 TET1Q8NFU7 2136 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 C4orf3Q8WVX3 66 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 PLAC8Q9NZF1 115 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 V9GYV3 84 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 HYDINQ4G0P3 5121 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 KMT2CQ8NEZ4 4911 aaKnown RBP1.65□□□□□ -2.15
CD46-213ENST00000471987 PLXNB2O15031 1838 aa1.65□□□□□ -2.15
CD46-213ENST00000471987 C4BP0C0L5 1744 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 ARHGAP32A7KAX9 2087 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 EPPK1P58107 5090 aaKnown RBP1.64□□□□□ -2.15
CD46-213ENST00000471987 IGKV3-7A0A075B6H7 116 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 IGKV3D-7A0A0C4DH55 119 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 F8VRH5 84 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 CCL3L1P16619 93 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 CCL18P55774 89 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 NREPQ16612 68 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 HIGD2AQ9BW72 106 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 PSORS1C2Q9UIG4 136 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 LINC01558Q9Y6Z2 57 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 R4GMQ9 66 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 C2CD3Q4AC94 2353 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 CSMD1Q96PZ7 3565 aa1.64□□□□□ -2.15
CD46-213ENST00000471987 ESPL1Q14674 2120 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 LCE6AA0A183 80 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 CTXND1A0A1B0GTU2 59 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 J3QKU1 62 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 M0R135 149 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 FDCSPQ8NFU4 85 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 COX7B2Q8TF08 81 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 TMEM263Q8WUH6 116 aaKnown RBP1.63□□□□□ -2.15
CD46-213ENST00000471987 PATE1Q8WXA2 126 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 OBSCN-AS1Q96MR7 158 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 PRO3102Q9H379 93 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 CEP250Q9BV73 2442 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 NF1P21359 2839 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 PIEZO2Q9H5I5 2752 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 FREM2Q5SZK8 3169 aa1.63□□□□□ -2.15
CD46-213ENST00000471987 A0A1W2PNN7 141 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 UQCR11O14957 56 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 MGPP08493 103 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 PDE6GP18545 87 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 HCP5Q6MZN7 132 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 Q6ZTI0 123 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 LINC00208Q96KT6 92 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 WFDC6Q9BQY6 131 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms