RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
SSR4-207ENST00000471724 RPL24P83731 157 aaKnown RBP8.83□□□□□ -1
SSR4-207ENST00000471724 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
SSR4-207ENST00000471724 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
SSR4-207ENST00000471724 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
SSR4-207ENST00000471724 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
SSR4-207ENST00000471724 FAM229AH3BQW9 127 aa8.82□□□□□ -1
SSR4-207ENST00000471724 SERTAD4-AS1Q5TG53 156 aa8.82□□□□□ -1
SSR4-207ENST00000471724 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
SSR4-207ENST00000471724 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
SSR4-207ENST00000471724 SPATA45Q537H7 98 aa8.81□□□□□ -1
SSR4-207ENST00000471724 DAND5Q8N907 189 aa8.81□□□□□ -1
SSR4-207ENST00000471724 KRTAP17-1Q9BYP8 105 aa8.81□□□□□ -1
SSR4-207ENST00000471724 COX8AP10176 69 aa8.8□□□□□ -1
SSR4-207ENST00000471724 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
SSR4-207ENST00000471724 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
SSR4-207ENST00000471724 COPS9Q8WXC6 57 aa8.8□□□□□ -1
SSR4-207ENST00000471724 LITAFQ99732 161 aa8.8□□□□□ -1
SSR4-207ENST00000471724 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
SSR4-207ENST00000471724 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
SSR4-207ENST00000471724 VPREB1P12018 145 aa8.79□□□□□ -1
SSR4-207ENST00000471724 Q5VSD8 79 aa8.79□□□□□ -1
SSR4-207ENST00000471724 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
SSR4-207ENST00000471724 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
SSR4-207ENST00000471724 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
SSR4-207ENST00000471724 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
SSR4-207ENST00000471724 SPANXDQ9BXN6 97 aa8.79□□□□□ -1
SSR4-207ENST00000471724 SPANXCQ9NY87 97 aa8.79□□□□□ -1
SSR4-207ENST00000471724 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
SSR4-207ENST00000471724 DLEU1O43261 78 aa8.78□□□□□ -1
SSR4-207ENST00000471724 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SSR4-207ENST00000471724 UBE2BP63146 152 aa8.78□□□□□ -1
SSR4-207ENST00000471724 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
SSR4-207ENST00000471724 Q6ZVH6 145 aa8.78□□□□□ -1
SSR4-207ENST00000471724 C22orf24Q9Y442 160 aa8.78□□□□□ -1
SSR4-207ENST00000471724 S100A12P80511 92 aa8.77□□□□□ -1.01
SSR4-207ENST00000471724 NDUFC2O95298 119 aa8.76□□□□□ -1.01
SSR4-207ENST00000471724 SMIM6P0DI80 62 aa8.76□□□□□ -1.01
SSR4-207ENST00000471724 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
SSR4-207ENST00000471724 DNAH8Q96JB1 4490 aa8.76□□□□□ -1.01
SSR4-207ENST00000471724 IFITM1P13164 125 aa8.75□□□□□ -1.01
SSR4-207ENST00000471724 NPC2P61916 151 aa8.75□□□□□ -1.01
SSR4-207ENST00000471724 SLC25A34Q6PIV7 304 aa8.75□□□□□ -1.01
SSR4-207ENST00000471724 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
SSR4-207ENST00000471724 SPANXB1Q9NS25 103 aaPredicted RBP8.75□□□□□ -1.01
SSR4-207ENST00000471724 M0R378 163 aa8.74□□□□□ -1.01
SSR4-207ENST00000471724 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
SSR4-207ENST00000471724 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
SSR4-207ENST00000471724 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
SSR4-207ENST00000471724 Q8NDZ9 215 aa8.74□□□□□ -1.01
SSR4-207ENST00000471724 C14orf144Q96I85 54 aa8.74□□□□□ -1.01
SSR4-207ENST00000471724 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
SSR4-207ENST00000471724 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
SSR4-207ENST00000471724 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
SSR4-207ENST00000471724 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
SSR4-207ENST00000471724 NCR3O14931 201 aa8.72□□□□□ -1.01
SSR4-207ENST00000471724 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSR4-207ENST00000471724 LOC105371267A0A1B0GV96 52 aa8.71□□□□□ -1.02
SSR4-207ENST00000471724 HIGD1BQ9P298 99 aa8.71□□□□□ -1.02
SSR4-207ENST00000471724 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
SSR4-207ENST00000471724 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
SSR4-207ENST00000471724 IGLV1-50A0A075B6I6 118 aa8.69□□□□□ -1.02
SSR4-207ENST00000471724 IGKV2-28A0A075B6P5 120 aa8.69□□□□□ -1.02
SSR4-207ENST00000471724 RPL37AP8A6NKH3 93 aa8.69□□□□□ -1.02
SSR4-207ENST00000471724 IGKV2D-28P01615 120 aa8.69□□□□□ -1.02
SSR4-207ENST00000471724 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
SSR4-207ENST00000471724 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
SSR4-207ENST00000471724 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
SSR4-207ENST00000471724 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
SSR4-207ENST00000471724 HIST1H4GQ99525 98 aa8.68□□□□□ -1.02
SSR4-207ENST00000471724 CBY1Q9Y3M2 126 aa8.68□□□□□ -1.02
SSR4-207ENST00000471724 PRYO14603 147 aa8.67□□□□□ -1.02
SSR4-207ENST00000471724 S100A7L2Q5SY68 101 aa8.67□□□□□ -1.02
SSR4-207ENST00000471724 MUSTN1Q8IVN3 82 aa8.67□□□□□ -1.02
SSR4-207ENST00000471724 UQCR10Q9UDW1 63 aa8.67□□□□□ -1.02
SSR4-207ENST00000471724 FAT1Q14517 4588 aa8.66□□□□□ -1.02
SSR4-207ENST00000471724 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SSR4-207ENST00000471724 TRBV10-3A0A0K0K1G6 114 aa8.66□□□□□ -1.02
SSR4-207ENST00000471724 DDTP30046 118 aa8.66□□□□□ -1.02
SSR4-207ENST00000471724 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
SSR4-207ENST00000471724 BCE1O60756 84 aa8.65□□□□□ -1.02
SSR4-207ENST00000471724 TAL2Q16559 108 aa8.65□□□□□ -1.02
SSR4-207ENST00000471724 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
SSR4-207ENST00000471724 TMEM126AQ9H061 195 aa8.65□□□□□ -1.02
SSR4-207ENST00000471724 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
SSR4-207ENST00000471724 IGLV7-43P04211 117 aa8.64□□□□□ -1.03
SSR4-207ENST00000471724 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
SSR4-207ENST00000471724 OR13C6PQ8NH95 151 aa8.63□□□□□ -1.03
SSR4-207ENST00000471724 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
SSR4-207ENST00000471724 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 A4D1N5 150 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 UBE2AP49459 152 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
SSR4-207ENST00000471724 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 C12orf57Q99622 126 aa8.61□□□□□ -1.03
SSR4-207ENST00000471724 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
SSR4-207ENST00000471724 A6NJY4 79 aa8.6□□□□□ -1.03
SSR4-207ENST00000471724 SPRR1AP35321 89 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 998 ms