RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 CGREF1Q99674 301 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 LINC00846Q9NV44 126 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 GNG8Q9UK08 70 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 TROQ12816 1431 aaPredicted RBP-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 MYH6P13533 1939 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 MYH8P13535 1937 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 MYO18BQ8IUG5 2567 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 XRN1Q8IZH2 1706 aaKnown RBP-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 ARHGAP5Q13017 1502 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
NCKAP1-203ENST00000471640 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 SHROOM2Q13796 1616 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 UBR4Q5T4S7 5183 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 CORTO00230 105 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 CCL22O00626 93 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 DLEU1O43261 78 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 NDUFA3O95167 84 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 UQCRHP07919 91 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 IGLC2P0DOY2 106 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 IGLC3P0DOY3 106 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 KRTDAPP60985 99 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 S100A12P80511 92 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 PMCHL1Q16048 86 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 EDC4Q6P2E9 1401 aaKnown RBP-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 PSENENQ9NZ42 101 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 HIGD1BQ9P298 99 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 IER3IP1Q9Y5U9 82 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 PKHD1L1Q86WI1 4243 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 DSPP15924 2871 aaKnown RBP-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 PSME4Q14997 1843 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 DOCK2Q92608 1830 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 CUX1P39880 1505 aa-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.34□□□□□ -2.46
NCKAP1-203ENST00000471640 CC2D2AQ9P2K1 1620 aa-0.35□□□□□ -2.46
NCKAP1-203ENST00000471640 PZPP20742 1482 aa-0.35□□□□□ -2.46
NCKAP1-203ENST00000471640 ANK3Q12955 4377 aaKnown RBP-0.35□□□□□ -2.46
NCKAP1-203ENST00000471640 SPG11Q96JI7 2443 aa-0.35□□□□□ -2.46
NCKAP1-203ENST00000471640 KNDC1Q76NI1 1749 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 ADAMTS12P58397 1594 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 APOBP04114 4563 aaKnown RBP-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 ABCC5O15440 1437 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 CLIP1P30622 1438 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 EPPK1P58107 5090 aaKnown RBP-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 TRBV25-1A0A075B6N4 114 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 LINC00587B1AMM8 73 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 LEPROTL1O95214 131 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 HMGN1P05114 100 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 COL5A1-AS1Q5SY13 56 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 PMCHL2Q9BQD1 86 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 AP4S1Q9Y587 144 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 NIPBLQ6KC79 2804 aaeCLIP-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 A0A0G2JMZ2 1700 aa-0.35□□□□□ -2.47
NCKAP1-203ENST00000471640 RANBP2P49792 3224 aaKnown RBP-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 COL4A6Q14031 1691 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 CUL7Q14999 1698 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 ANKRD50Q9ULJ7 1429 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 NCOA3Q9Y6Q9 1424 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 PAPPA2Q9BXP8 1791 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 D6R8Y8 96 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 F8WEM9 126 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 H7BZZ5 65 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 MT-ATP8P03928 68 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 FAUP35544 74 aaKnown RBP-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 S100A10P60903 97 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 DEFA5Q01523 94 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 ETDBQ3ZM63 59 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 MUSTN1Q8IVN3 82 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 TRGV9Q99603 122 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 NEBP20929 6669 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 FRYQ5TBA9 3013 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 MLH3Q9UHC1 1453 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 NRXN1Q9ULB1 1477 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 FOCADQ5VW36 1801 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 BIRC6Q9NR09 4857 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 DIP2CQ9Y2E4 1556 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 A0A0C4DFX4 3053 aa-0.36□□□□□ -2.47
NCKAP1-203ENST00000471640 MAPKBP1O60336 1514 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 PTPN23Q9H3S7 1636 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 UQCRHLA0A096LP55 91 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 C20orf202A1L168 122 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 H3BQ15 152 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 NDUFC1O43677 76 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 MT1AP04731 61 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 S4R3F8 94 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 NBASA2RRP1 2371 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 ANKRD36BQ8N2N9 1353 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 LAMA3Q16787 3333 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 NRKQ7Z2Y5 1582 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 KNL1Q8NG31 2342 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 DNAH1Q9P2D7 4330 aa-0.37□□□□□ -2.47
NCKAP1-203ENST00000471640 CICQ96RK0 1608 aaPredicted RBP-0.38□□□□□ -2.47
NCKAP1-203ENST00000471640 NBEAL2Q6ZNJ1 2754 aa-0.38□□□□□ -2.47
NCKAP1-203ENST00000471640 NUP188Q5SRE5 1749 aa-0.38□□□□□ -2.47
NCKAP1-203ENST00000471640 DNAH11Q96DT5 4516 aa-0.38□□□□□ -2.47
NCKAP1-203ENST00000471640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.38□□□□□ -2.472e-6■□□□□ 8.2
NCKAP1-203ENST00000471640 IQCF6A8MYZ5 107 aa-0.38□□□□□ -2.47
NCKAP1-203ENST00000471640 ATOX1O00244 68 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms