RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 H3BUA1 57 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 ERC2-IT1O76042 136 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 CRYBG3Q68DQ2 2970 aa2.9□□□□□ -1.94
VPS50-210ENST00000471188 IGHV4-28A0A0C4DH34 117 aa2.9□□□□□ -1.94
VPS50-210ENST00000471188 UBE2BP63146 152 aa2.9□□□□□ -1.94
VPS50-210ENST00000471188 Q1T7F1 81 aa2.9□□□□□ -1.94
VPS50-210ENST00000471188 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.94
VPS50-210ENST00000471188 TRGV4A0A0C4DH28 118 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 LINC00269Q8N2A0 174 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 OCR1Q9BZK8 76 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 ANKRD17O75179 2603 aaKnown RBP2.9□□□□□ -1.95
VPS50-210ENST00000471188 OTOGLQ3ZCN5 2332 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 STHQ8IWL8 128 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 KRTAP17-1Q9BYP8 105 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 NOP10Q9NPE3 64 aaKnown RBP2.9□□□□□ -1.95
VPS50-210ENST00000471188 ATRXP46100 2492 aa2.9□□□□□ -1.95
VPS50-210ENST00000471188 PTPN13Q12923 2485 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 SYCNQ0VAF6 134 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 DEFB136Q30KP8 78 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 SMIM29Q86T20 159 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 C11orf45Q8TAV5 145 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 SETD2Q9BYW2 2564 aaPredicted RBP2.89□□□□□ -1.95
VPS50-210ENST00000471188 LINC00959A0A1B0GUT2 108 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 IGHV4-38-2P0DP08 117 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 HIGD2BQ4VC39 106 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 DIRC1Q969H9 104 aa2.89□□□□□ -1.95
VPS50-210ENST00000471188 IGKV4-1P06312 121 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 C10orf25Q5T742 122 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 HRNRQ86YZ3 2850 aaPredicted RBP2.88□□□□□ -1.95
VPS50-210ENST00000471188 APOC4P55056 127 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 C9orf66Q5T8R8 295 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 TRBV6-8A0A0A6YYG3 113 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 A6NED7 52 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 LYRM9A8MSI8 78 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 COX7BP24311 80 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 UBE2AP49459 152 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 Q8IZM0 81 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 ZNF292O60281 2723 aa2.88□□□□□ -1.95
VPS50-210ENST00000471188 A0A096LPF7 62 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 M0R378 163 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 LMO4P61968 165 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 A6NDX4 124 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 PSCAO43653 123 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 Q8NDZ9 215 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 MAP6D1Q9H9H5 199 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 ZFYVE26Q68DK2 2539 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 C11orf71Q6IPW1 123 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 DEFB105AQ8NG35 78 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
VPS50-210ENST00000471188 C16orf90A8MZG2 172 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 XAGE1AQ9HD64 81 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 AKAP9Q99996 3911 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 ABCA2Q9BZC7 2435 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 USP9YO00507 2555 aaPredicted RBP2.86□□□□□ -1.95
VPS50-210ENST00000471188 H3BQ85 93 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 ZNF73O43830 326 aaPredicted RBP2.86□□□□□ -1.95
VPS50-210ENST00000471188 Q5VV11 94 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 CEP295Q9C0D2 2601 aa2.86□□□□□ -1.95
VPS50-210ENST00000471188 NDUFS5O43920 106 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 LINC00612Q8N6U2 182 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 TTC28Q96AY4 2481 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 FSHBP01225 129 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 IGHV4-59P01825 116 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 DEFB130BP0DP73 79 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 DEFB130AP0DP74 79 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 PLA2G2AP14555 144 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 COX17Q14061 63 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 UNQ6190/PRO20217Q6UXQ8 127 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 C18orf65Q6ZTR6 163 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 ANGP03950 147 aaKnown RBP2.85□□□□□ -1.95
VPS50-210ENST00000471188 X6R8D5 127 aa2.85□□□□□ -1.95
VPS50-210ENST00000471188 USP9XQ93008 2570 aaPredicted RBP2.85□□□□□ -1.95
VPS50-210ENST00000471188 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.84□□□□□ -1.95
VPS50-210ENST00000471188 A0A1W2PPR1 153 aa2.84□□□□□ -1.95
VPS50-210ENST00000471188 ZFHX2Q9C0A1 2572 aaPredicted RBP2.84□□□□□ -1.95
VPS50-210ENST00000471188 HIVEP3Q5T1R4 2406 aa2.84□□□□□ -1.95
VPS50-210ENST00000471188 F8P00451 2351 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 IGHV4-31P0DP07 118 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 SPAG11BQ08648 103 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.96
VPS50-210ENST00000471188 B9D2Q9BPU9 175 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 NBEAL2Q6ZNJ1 2754 aa2.84□□□□□ -1.96
VPS50-210ENST00000471188 CHD6Q8TD26 2715 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 IGHV4-61A0A0C4DH41 118 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 GYPEP15421 78 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 KRTAP10-2P60368 255 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 ATP11AUNQ6ZP68 121 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 LIMD2Q9BT23 127 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 APCP25054 2843 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 NDUFB1O75438 58 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms