RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
VAMP3-202ENST00000470357 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
VAMP3-202ENST00000470357 TRBV30A0A0K0K1B3 111 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 SRSF9Q13242 221 aaKnown RBP eCLIP4.38□□□□□ -1.71
VAMP3-202ENST00000470357 COX17Q14061 63 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 Q6ZR54 194 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
VAMP3-202ENST00000470357 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 IFITM1P13164 125 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 CTAG1AP78358 180 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 C6orf223Q8N319 242 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 C15orf56Q8N910 161 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
VAMP3-202ENST00000470357 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.36□□□□□ -1.71
VAMP3-202ENST00000470357 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
VAMP3-202ENST00000470357 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
VAMP3-202ENST00000470357 HIGD2BQ4VC39 106 aa4.36□□□□□ -1.71
VAMP3-202ENST00000470357 C1orf134Q5TEV5 83 aa4.36□□□□□ -1.71
VAMP3-202ENST00000470357 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
VAMP3-202ENST00000470357 A6NDN8 102 aa4.35□□□□□ -1.71
VAMP3-202ENST00000470357 M0R2N4 97 aa4.35□□□□□ -1.71
VAMP3-202ENST00000470357 LINC00158P58513 81 aa4.35□□□□□ -1.71
VAMP3-202ENST00000470357 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
VAMP3-202ENST00000470357 CEND1Q8N111 149 aa4.35□□□□□ -1.71
VAMP3-202ENST00000470357 SMIM13P0DJ93 91 aa4.34□□□□□ -1.71
VAMP3-202ENST00000470357 LBHQ53QV2 105 aaPredicted RBP4.34□□□□□ -1.71
VAMP3-202ENST00000470357 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
VAMP3-202ENST00000470357 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
VAMP3-202ENST00000470357 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
VAMP3-202ENST00000470357 LITAFQ99732 161 aa4.34□□□□□ -1.71
VAMP3-202ENST00000470357 NDUFC2-KCTD14E9PQ53 114 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 PFN2P35080 140 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 HINT1P49773 126 aaPredicted RBP4.33□□□□□ -1.72
VAMP3-202ENST00000470357 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
VAMP3-202ENST00000470357 BVES-AS1Q5T3Y7 98 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 Q6ZRU5 148 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 MIR7-3HGQ8N6C7 128 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 FAT1Q14517 4588 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
VAMP3-202ENST00000470357 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 LRCOL1A6NCL2 159 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 LECT2O14960 151 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 RTL8CO15255 209 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 TLX1NBP0CAT3 122 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 COL5A1-AS1Q5SY13 56 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 MUSTN1Q8IVN3 82 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 LINC00308Q8TCZ7 52 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 MYCBP2O75592 4640 aa4.32□□□□□ -1.72
VAMP3-202ENST00000470357 A0A087WTM6 91 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 LOC107984640A0A0U1RRK4 108 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 BATFQ16520 125 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 Q8N814 137 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
VAMP3-202ENST00000470357 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 A0A1B0GWB2 263 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 PRYO14603 147 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 NDUFC2O95298 119 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 FXYD2P54710 66 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
VAMP3-202ENST00000470357 DAND5Q8N907 189 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
VAMP3-202ENST00000470357 NHP2Q9NX24 153 aaKnown RBP4.3□□□□□ -1.72
VAMP3-202ENST00000470357 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
VAMP3-202ENST00000470357 WFDC2Q14508 124 aa4.29□□□□□ -1.72
VAMP3-202ENST00000470357 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
VAMP3-202ENST00000470357 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
VAMP3-202ENST00000470357 CBY1Q9Y3M2 126 aa4.29□□□□□ -1.72
VAMP3-202ENST00000470357 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.28□□□□□ -1.72
VAMP3-202ENST00000470357 TRAV13-2A0A0B4J235 113 aa4.28□□□□□ -1.72
VAMP3-202ENST00000470357 NPC2P61916 151 aa4.28□□□□□ -1.72
VAMP3-202ENST00000470357 RPL18AQ02543 176 aaKnown RBP4.28□□□□□ -1.72
VAMP3-202ENST00000470357 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
VAMP3-202ENST00000470357 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 TRBV10-2A0A0K0K1G8 114 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 CFC1P0CG37 223 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 LYRM7Q5U5X0 104 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms