RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 IGLV5-37A0A075B6J1 123 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 PRSS2P07478 247 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 RPL39P62891 51 aaKnown RBP4.42□□□□□ -1.7
LSM2-210ENST00000470086 IFITM3Q01628 133 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
LSM2-210ENST00000470086 DDTP30046 118 aa4.41□□□□□ -1.7
LSM2-210ENST00000470086 PSMB2P49721 201 aa4.41□□□□□ -1.7
LSM2-210ENST00000470086 FA2HQ7L5A8 372 aa4.41□□□□□ -1.7
LSM2-210ENST00000470086 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
LSM2-210ENST00000470086 BORCS7-ASMTA0A0B4J1R7 106 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 TRBV30A0A0K0K1B3 111 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 TMEM241Q24JQ0 296 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 TMUB2Q71RG4 321 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 Q8N377 158 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 C9orf62Q8N4C0 152 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 MBD3L1Q8WWY6 194 aa4.4□□□□□ -1.71
LSM2-210ENST00000470086 F2Z2F3 143 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 K7ERU9 68 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 UBE2AP49459 152 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 RPS20P60866 119 aaKnown RBP4.39□□□□□ -1.71
LSM2-210ENST00000470086 Q8NBF4 154 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
LSM2-210ENST00000470086 IGKV2-28A0A075B6P5 120 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 NDUFC2O95298 119 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 IGKV2D-28P01615 120 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 SCGB1D4Q6XE38 83 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 CYTL1Q9NRR1 136 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
LSM2-210ENST00000470086 NDUFS5O43920 106 aa4.37□□□□□ -1.71
LSM2-210ENST00000470086 AKR1D1P51857 326 aa4.37□□□□□ -1.71
LSM2-210ENST00000470086 NRACQ8N912 160 aa4.37□□□□□ -1.71
LSM2-210ENST00000470086 PLEKHB2Q96CS7 222 aa4.37□□□□□ -1.71
LSM2-210ENST00000470086 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
LSM2-210ENST00000470086 CCL20P78556 96 aa4.36□□□□□ -1.71
LSM2-210ENST00000470086 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
LSM2-210ENST00000470086 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
LSM2-210ENST00000470086 Q8NDZ9 215 aa4.36□□□□□ -1.71
LSM2-210ENST00000470086 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
LSM2-210ENST00000470086 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 FAM236DA0A1B0GTK5 79 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 AMN1Q8IY45 258 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 FAM213BQ8TBF2 198 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 SPRR4Q96PI1 79 aa4.35□□□□□ -1.71
LSM2-210ENST00000470086 NEBP20929 6669 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 A0A1B0GVG6 124 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 C9orf92A6NGG3 77 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 J3KT08 172 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 MT2AP02795 61 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 SPAG11AQ6PDA7 123 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 SFT2D1Q8WV19 159 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 GNB1LQ9BYB4 327 aa4.34□□□□□ -1.71
LSM2-210ENST00000470086 MT1FP04733 61 aa4.33□□□□□ -1.72
LSM2-210ENST00000470086 FCER1GP30273 86 aa4.33□□□□□ -1.72
LSM2-210ENST00000470086 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
LSM2-210ENST00000470086 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
LSM2-210ENST00000470086 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
LSM2-210ENST00000470086 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
LSM2-210ENST00000470086 FXYD6-FXYD2A0A087WZ82 144 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 A0A1B0GX51 115 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 M0R378 163 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 GNG4P50150 75 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 TEX261Q6UWH6 196 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 EIF5A2Q9GZV4 153 aaKnown RBP4.32□□□□□ -1.72
LSM2-210ENST00000470086 TOMM7Q9P0U1 55 aa4.32□□□□□ -1.72
LSM2-210ENST00000470086 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
LSM2-210ENST00000470086 TEX43Q6ZNM6 134 aa4.31□□□□□ -1.72
LSM2-210ENST00000470086 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
LSM2-210ENST00000470086 HIGD2AQ9BW72 106 aa4.31□□□□□ -1.72
LSM2-210ENST00000470086 C20orf202A1L168 122 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 PSPHP1O15172 72 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 HBBP68871 147 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 MRPS36P82909 103 aaKnown RBP4.3□□□□□ -1.72
LSM2-210ENST00000470086 RHEBQ15382 184 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 KIAA1644Q3SXP7 199 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 GNG13Q9P2W3 67 aa4.3□□□□□ -1.72
LSM2-210ENST00000470086 SPINK1P00995 79 aa4.29□□□□□ -1.72
LSM2-210ENST00000470086 CFC1P0CG37 223 aa4.29□□□□□ -1.72
LSM2-210ENST00000470086 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
LSM2-210ENST00000470086 TMEM191AQ9H0A3 160 aa4.29□□□□□ -1.72
LSM2-210ENST00000470086 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
LSM2-210ENST00000470086 MOBPQ13875 183 aa4.28□□□□□ -1.72
LSM2-210ENST00000470086 C6orf99Q4VX62 202 aa4.28□□□□□ -1.72
LSM2-210ENST00000470086 ATP5L2Q7Z4Y8 100 aa4.28□□□□□ -1.72
LSM2-210ENST00000470086 Q8IZM0 81 aa4.28□□□□□ -1.72
LSM2-210ENST00000470086 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms