RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 NKAPP1Q8N9T2 125 aa14.44□□□□□ -0.1
SREBF1-208ENST00000469356 RYR1P21817 5038 aa14.44□□□□□ -0.1
SREBF1-208ENST00000469356 M0QXV9 152 aa14.43□□□□□ -0.1
SREBF1-208ENST00000469356 TP73-AS1Q9UF72 201 aa14.43□□□□□ -0.1
SREBF1-208ENST00000469356 PAM16Q9Y3D7 125 aa14.43□□□□□ -0.1
SREBF1-208ENST00000469356 LINC00528Q8N1L1 170 aa14.42□□□□□ -0.1
SREBF1-208ENST00000469356 COPS9Q8WXC6 57 aa14.42□□□□□ -0.1
SREBF1-208ENST00000469356 Q8N1X5 172 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 C22orf24Q9Y442 160 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 IGLV5-37A0A075B6J1 123 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 COX8AP10176 69 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 S100A12P80511 92 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 SERTAD4-AS1Q5TG53 156 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 Q6ZVH6 145 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 DAND5Q8N907 189 aa14.41□□□□□ -0.1
SREBF1-208ENST00000469356 LOC107984156A0A0G2JMH3 177 aa14.4□□□□□ -0.1
SREBF1-208ENST00000469356 PLA2G1BP04054 148 aaKnown RBP14.4□□□□□ -0.1
SREBF1-208ENST00000469356 ARL17AQ8IVW1 177 aa14.4□□□□□ -0.1
SREBF1-208ENST00000469356 BOD1L2Q8IYS8 172 aa14.4□□□□□ -0.1
SREBF1-208ENST00000469356 UBE2BP63146 152 aa14.39□□□□□ -0.11
SREBF1-208ENST00000469356 PHF5AQ7RTV0 110 aaKnown RBP14.39□□□□□ -0.11
SREBF1-208ENST00000469356 KIAA1109Q2LD37 5005 aa14.38□□□□□ -0.11
SREBF1-208ENST00000469356 ADAMTSL4-AS1Q5T5F5 129 aa14.38□□□□□ -0.11
SREBF1-208ENST00000469356 MRPL55Q7Z7F7 128 aaKnown RBP14.38□□□□□ -0.11
SREBF1-208ENST00000469356 DLEU1O43261 78 aa14.37□□□□□ -0.11
SREBF1-208ENST00000469356 VPREB1P12018 145 aa14.37□□□□□ -0.11
SREBF1-208ENST00000469356 LITAFQ99732 161 aa14.37□□□□□ -0.11
SREBF1-208ENST00000469356 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
SREBF1-208ENST00000469356 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
SREBF1-208ENST00000469356 RPL37AP61513 92 aaKnown RBP14.36□□□□□ -0.11
SREBF1-208ENST00000469356 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
SREBF1-208ENST00000469356 HSPG2P98160 4391 aa14.35□□□□□ -0.11
SREBF1-208ENST00000469356 IFITM1P13164 125 aa14.35□□□□□ -0.11
SREBF1-208ENST00000469356 Q5VSD8 79 aa14.34□□□□□ -0.11
SREBF1-208ENST00000469356 SLC25A34Q6PIV7 304 aa14.34□□□□□ -0.11
SREBF1-208ENST00000469356 LINC00308Q8TCZ7 52 aa14.34□□□□□ -0.11
SREBF1-208ENST00000469356 NDUFC2O95298 119 aa14.33□□□□□ -0.12
SREBF1-208ENST00000469356 NPC2P61916 151 aa14.33□□□□□ -0.12
SREBF1-208ENST00000469356 SRSF9Q13242 221 aaKnown RBP eCLIP14.33□□□□□ -0.12
SREBF1-208ENST00000469356 C14orf144Q96I85 54 aa14.33□□□□□ -0.12
SREBF1-208ENST00000469356 M0R378 163 aa14.32□□□□□ -0.12
SREBF1-208ENST00000469356 LINC00167Q96N53 147 aa14.31□□□□□ -0.12
SREBF1-208ENST00000469356 PPDPFQ9H3Y8 114 aa14.31□□□□□ -0.12
SREBF1-208ENST00000469356 SPANXB1Q9NS25 103 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-208ENST00000469356 SMIM6P0DI80 62 aa14.29□□□□□ -0.12
SREBF1-208ENST00000469356 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
SREBF1-208ENST00000469356 GAGE10A6NGK3 116 aa14.28□□□□□ -0.12
SREBF1-208ENST00000469356 SOSTDC1Q6X4U4 206 aa14.27□□□□□ -0.12
SREBF1-208ENST00000469356 LINC00518Q8N0U6 118 aa14.26□□□□□ -0.13
SREBF1-208ENST00000469356 PSORS1C2Q9UIG4 136 aa14.26□□□□□ -0.13
SREBF1-208ENST00000469356 LOC105371267A0A1B0GV96 52 aa14.25□□□□□ -0.13
SREBF1-208ENST00000469356 NCR3O14931 201 aa14.25□□□□□ -0.13
SREBF1-208ENST00000469356 HIGD1BQ9P298 99 aa14.25□□□□□ -0.13
SREBF1-208ENST00000469356 RPL37AP8A6NKH3 93 aa14.24□□□□□ -0.13
SREBF1-208ENST00000469356 PRR3P79522 188 aaKnown RBP14.24□□□□□ -0.13
SREBF1-208ENST00000469356 MUSTN1Q8IVN3 82 aa14.24□□□□□ -0.13
SREBF1-208ENST00000469356 Q8NDZ9 215 aa14.24□□□□□ -0.13
SREBF1-208ENST00000469356 HIST1H4GQ99525 98 aa14.24□□□□□ -0.13
SREBF1-208ENST00000469356 CBY1Q9Y3M2 126 aa14.24□□□□□ -0.13
SREBF1-208ENST00000469356 C1orf137Q5JT78 98 aa14.23□□□□□ -0.13
SREBF1-208ENST00000469356 S100A7L2Q5SY68 101 aa14.23□□□□□ -0.13
SREBF1-208ENST00000469356 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
SREBF1-208ENST00000469356 IGKV2-28A0A075B6P5 120 aa14.21□□□□□ -0.13
SREBF1-208ENST00000469356 IGKV2D-28P01615 120 aa14.21□□□□□ -0.13
SREBF1-208ENST00000469356 HERC2O95714 4834 aa14.21□□□□□ -0.14
SREBF1-208ENST00000469356 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
SREBF1-208ENST00000469356 UQCR10Q9UDW1 63 aa14.2□□□□□ -0.14
SREBF1-208ENST00000469356 DDTP30046 118 aa14.19□□□□□ -0.14
SREBF1-208ENST00000469356 VPS13BQ7Z7G8 4022 aa14.17□□□□□ -0.14
SREBF1-208ENST00000469356 FAT1Q14517 4588 aa14.17□□□□□ -0.14
SREBF1-208ENST00000469356 PRYO14603 147 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 TAL2Q16559 108 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 REG3GQ6UW15 175 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 KRTAP11-1Q8IUC1 163 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 OR13C6PQ8NH95 151 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 TMEM126AQ9H061 195 aa14.16□□□□□ -0.14
SREBF1-208ENST00000469356 TRBV10-3A0A0K0K1G6 114 aa14.15□□□□□ -0.14
SREBF1-208ENST00000469356 BCE1O60756 84 aa14.15□□□□□ -0.15
SREBF1-208ENST00000469356 C2orf91Q6ZV80 131 aa14.15□□□□□ -0.15
SREBF1-208ENST00000469356 IGLV7-43P04211 117 aa14.14□□□□□ -0.15
SREBF1-208ENST00000469356 KRTAP10-4P60372 401 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-208ENST00000469356 KRTAP17-1Q9BYP8 105 aa14.14□□□□□ -0.15
SREBF1-208ENST00000469356 KCNQ1DNQ9H478 68 aa14.14□□□□□ -0.15
SREBF1-208ENST00000469356 TRAV13-2A0A0B4J235 113 aa14.13□□□□□ -0.15
SREBF1-208ENST00000469356 IGLV6-57P01721 117 aa14.13□□□□□ -0.15
SREBF1-208ENST00000469356 INAFM2P0DMQ5 153 aa14.12□□□□□ -0.15
SREBF1-208ENST00000469356 A4D1N5 150 aa14.11□□□□□ -0.15
SREBF1-208ENST00000469356 RPL28P46779 137 aaKnown RBP14.11□□□□□ -0.15
SREBF1-208ENST00000469356 UBE2AP49459 152 aa14.1□□□□□ -0.15
SREBF1-208ENST00000469356 SPINK6Q6UWN8 80 aa14.1□□□□□ -0.15
SREBF1-208ENST00000469356 C12orf57Q99622 126 aa14.1□□□□□ -0.15
SREBF1-208ENST00000469356 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
SREBF1-208ENST00000469356 TMEM238LA0A1B0GVL6 79 aa14.09□□□□□ -0.15
SREBF1-208ENST00000469356 A6NDN8 102 aa14.09□□□□□ -0.15
SREBF1-208ENST00000469356 A6NJY4 79 aa14.09□□□□□ -0.15
SREBF1-208ENST00000469356 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
SREBF1-208ENST00000469356 ETDCA0A1B0GVM5 59 aa14.08□□□□□ -0.16
SREBF1-208ENST00000469356 HINT1P49773 126 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-208ENST00000469356 FAM19A1Q7Z5A9 133 aa14.08□□□□□ -0.16
SREBF1-208ENST00000469356 LINC00337Q8N6G1 96 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms