RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
SSBP1-207ENST00000468267 SCO1O75880 301 aa10.22□□□□□ -0.77
SSBP1-207ENST00000468267 VPREB1P12018 145 aa10.22□□□□□ -0.77
SSBP1-207ENST00000468267 KRTAP4-8Q9BYQ9 185 aa10.22□□□□□ -0.77
SSBP1-207ENST00000468267 LINC00310P59036 64 aa10.21□□□□□ -0.77
SSBP1-207ENST00000468267 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
SSBP1-207ENST00000468267 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SSBP1-207ENST00000468267 SERF1AO75920 110 aa10.2□□□□□ -0.78
SSBP1-207ENST00000468267 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
SSBP1-207ENST00000468267 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
SSBP1-207ENST00000468267 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
SSBP1-207ENST00000468267 LINC00158P58513 81 aa10.19□□□□□ -0.78
SSBP1-207ENST00000468267 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
SSBP1-207ENST00000468267 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
SSBP1-207ENST00000468267 Q8NDZ9 215 aa10.18□□□□□ -0.78
SSBP1-207ENST00000468267 H0Y8G0 127 aa10.16□□□□□ -0.78
SSBP1-207ENST00000468267 UBE2AP49459 152 aa10.16□□□□□ -0.78
SSBP1-207ENST00000468267 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
SSBP1-207ENST00000468267 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
SSBP1-207ENST00000468267 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
SSBP1-207ENST00000468267 HERV-K104P63124 156 aa10.14□□□□□ -0.79
SSBP1-207ENST00000468267 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
SSBP1-207ENST00000468267 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
SSBP1-207ENST00000468267 FABP4P15090 132 aa10.13□□□□□ -0.79
SSBP1-207ENST00000468267 PLNP26678 52 aa10.13□□□□□ -0.79
SSBP1-207ENST00000468267 NDUFA12Q9UI09 145 aa10.13□□□□□ -0.79
SSBP1-207ENST00000468267 LPAP08519 4548 aa10.13□□□□□ -0.79
SSBP1-207ENST00000468267 A0A087X002 238 aa10.12□□□□□ -0.79
SSBP1-207ENST00000468267 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
SSBP1-207ENST00000468267 M0R378 163 aa10.12□□□□□ -0.79
SSBP1-207ENST00000468267 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
SSBP1-207ENST00000468267 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
SSBP1-207ENST00000468267 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
SSBP1-207ENST00000468267 CRYGAP11844 174 aa10.11□□□□□ -0.79
SSBP1-207ENST00000468267 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
SSBP1-207ENST00000468267 LEPROTO15243 131 aa10.1□□□□□ -0.79
SSBP1-207ENST00000468267 DPM2O94777 84 aa10.1□□□□□ -0.79
SSBP1-207ENST00000468267 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
SSBP1-207ENST00000468267 PLEKHB2Q96CS7 222 aa10.1□□□□□ -0.79
SSBP1-207ENST00000468267 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
SSBP1-207ENST00000468267 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SSBP1-207ENST00000468267 PRLHP81277 87 aa10.09□□□□□ -0.79
SSBP1-207ENST00000468267 BOD1L2Q8IYS8 172 aa10.09□□□□□ -0.79
SSBP1-207ENST00000468267 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
SSBP1-207ENST00000468267 PMCHL2Q9BQD1 86 aa10.08□□□□□ -0.8
SSBP1-207ENST00000468267 IGKCP01834 107 aa10.07□□□□□ -0.8
SSBP1-207ENST00000468267 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
SSBP1-207ENST00000468267 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
SSBP1-207ENST00000468267 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
SSBP1-207ENST00000468267 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.06□□□□□ -0.8
SSBP1-207ENST00000468267 J3QQQ9 107 aa10.06□□□□□ -0.8
SSBP1-207ENST00000468267 HERVK_113P61574 105 aa10.06□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 KRTAP13-2Q52LG2 175 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
SSBP1-207ENST00000468267 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
SSBP1-207ENST00000468267 NCR3O14931 201 aa10.04□□□□□ -0.8
SSBP1-207ENST00000468267 NMUP48645 174 aa10.04□□□□□ -0.8
SSBP1-207ENST00000468267 KRTAP9-2Q9BYQ4 174 aa10.04□□□□□ -0.8
SSBP1-207ENST00000468267 LOC107984156A0A0G2JMH3 177 aa10.03□□□□□ -0.8
SSBP1-207ENST00000468267 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
SSBP1-207ENST00000468267 PRYO14603 147 aa10.02□□□□□ -0.81
SSBP1-207ENST00000468267 TSPAN13O95857 204 aa10.02□□□□□ -0.81
SSBP1-207ENST00000468267 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
SSBP1-207ENST00000468267 DAND5Q8N907 189 aa10.02□□□□□ -0.81
SSBP1-207ENST00000468267 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
SSBP1-207ENST00000468267 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
SSBP1-207ENST00000468267 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
SSBP1-207ENST00000468267 PRR4Q16378 134 aa10□□□□□ -0.81
SSBP1-207ENST00000468267 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
SSBP1-207ENST00000468267 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
SSBP1-207ENST00000468267 SPRR1AP35321 89 aa9.99□□□□□ -0.81
SSBP1-207ENST00000468267 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
SSBP1-207ENST00000468267 E9PLD3 99 aa9.98□□□□□ -0.81
SSBP1-207ENST00000468267 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-207ENST00000468267 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
SSBP1-207ENST00000468267 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
SSBP1-207ENST00000468267 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
SSBP1-207ENST00000468267 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
SSBP1-207ENST00000468267 ETDCA0A1B0GVM5 59 aa9.95□□□□□ -0.82
SSBP1-207ENST00000468267 LINC01545Q5VT33 79 aa9.95□□□□□ -0.82
SSBP1-207ENST00000468267 MIEN1Q9BRT3 115 aa9.95□□□□□ -0.82
SSBP1-207ENST00000468267 DDTP30046 118 aa9.94□□□□□ -0.82
SSBP1-207ENST00000468267 S100A12P80511 92 aa9.94□□□□□ -0.82
SSBP1-207ENST00000468267 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
SSBP1-207ENST00000468267 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-207ENST00000468267 ZNF706Q9Y5V0 76 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-207ENST00000468267 NDUFC2O95298 119 aa9.93□□□□□ -0.82
SSBP1-207ENST00000468267 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
SSBP1-207ENST00000468267 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
SSBP1-207ENST00000468267 C3orf22Q8N5N4 141 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms