RNA–Protein interactions for RNA: ENST00000467849.1

CCNL1-210, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-210ENST00000467849 SPCS2Q15005 226 aa0.47□□□□□ -2.33
CCNL1-210ENST00000467849 SPATA8Q6RVD6 105 aa0.47□□□□□ -2.33
CCNL1-210ENST00000467849 TSKUQ8WUA8 353 aa0.47□□□□□ -2.33
CCNL1-210ENST00000467849 TCEAL4Q96EI5 215 aa0.47□□□□□ -2.33
CCNL1-210ENST00000467849 SDF2Q99470 211 aa0.47□□□□□ -2.33
CCNL1-210ENST00000467849 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
CCNL1-210ENST00000467849 DNAJC13O75165 2243 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 TRAV12-2A0A075B6T6 113 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 TCRBV3S1A0A5B6 114 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 HMGN1P05114 100 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 PIRTP0C851 137 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 COPZ1P61923 177 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 EMX2Q04743 252 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 TMEM141Q96I45 108 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 PAIP2BQ9ULR5 123 aaKnown RBP0.46□□□□□ -2.34
CCNL1-210ENST00000467849 DNAH8Q96JB1 4490 aa0.46□□□□□ -2.34
CCNL1-210ENST00000467849 IBTKQ9P2D0 1353 aaPredicted RBP0.45□□□□□ -2.34
CCNL1-210ENST00000467849 A0A087WTM6 91 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 SPANXN1Q5VSR9 72 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 SLC48A1Q6P1K1 146 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 SCIMPQ6UWF3 145 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 CYP2G1PQ6ZSU1 146 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 CD163L1Q9NR16 1453 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 FOCADQ5VW36 1801 aa0.45□□□□□ -2.34
CCNL1-210ENST00000467849 SPEF2Q9C093 1822 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 CCL3L1P16619 93 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
CCNL1-210ENST00000467849 Q5VSD8 79 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 DSCR8Q96T75 97 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 COA4Q9NYJ1 87 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 BET1LQ9NYM9 111 aa0.44□□□□□ -2.34
CCNL1-210ENST00000467849 GUCA1AP43080 201 aaPredicted RBP0.43□□□□□ -2.34
CCNL1-210ENST00000467849 SPINK7P58062 85 aa0.43□□□□□ -2.34
CCNL1-210ENST00000467849 CCDC58Q4VC31 144 aa0.43□□□□□ -2.34
CCNL1-210ENST00000467849 C9orf116Q5BN46 136 aaPredicted RBP0.43□□□□□ -2.34
CCNL1-210ENST00000467849 PPP1R1CQ8WVI7 109 aa0.43□□□□□ -2.34
CCNL1-210ENST00000467849 PSMG3Q9BT73 122 aaPredicted RBP0.43□□□□□ -2.34
CCNL1-210ENST00000467849 FAM107BQ9H098 131 aa0.43□□□□□ -2.34
CCNL1-210ENST00000467849 DAPK1P53355 1430 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 PRH1P02810 166 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 SMR3BP02814 79 aaPredicted RBP0.42□□□□□ -2.34
CCNL1-210ENST00000467849 C20orf197Q8N268 126 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 C10orf82Q8WW14 230 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 DPH3Q96FX2 82 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 TMEM242Q9NWH2 141 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 PLAC8Q9NZF1 115 aa0.42□□□□□ -2.34
CCNL1-210ENST00000467849 FLGP20930 4061 aaPredicted RBP0.42□□□□□ -2.34
CCNL1-210ENST00000467849 MYH7P12883 1935 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 CLPSL1A2RUU4 121 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 RBAKDNA6NC62 111 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 IL5P05113 134 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 UBE2G1P62253 170 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 SSBP1Q04837 148 aaKnown RBP0.41□□□□□ -2.34
CCNL1-210ENST00000467849 KCNRGQ8N5I3 272 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 LINC00470Q9BZP3 86 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 CCDC167Q9P0B6 97 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 RGPD2P0DJD1 1756 aa0.41□□□□□ -2.34
CCNL1-210ENST00000467849 MYH9P35579 1960 aaKnown RBP0.41□□□□□ -2.34
CCNL1-210ENST00000467849 VPS8Q8N3P4 1428 aa0.4□□□□□ -2.34
CCNL1-210ENST00000467849 MYO7BQ6PIF6 2116 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 K7EP13 123 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 UBE2D1P51668 147 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 C4orf33Q8N1A6 199 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 COX7B2Q8TF08 81 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 SPTSSAQ969W0 71 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 Q96NJ1 140 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 PSME4Q14997 1843 aa0.4□□□□□ -2.35
CCNL1-210ENST00000467849 GVQW2A0A096LPI5 108 aaPredicted RBP0.39□□□□□ -2.35
CCNL1-210ENST00000467849 MCRIP1C9JLW8 97 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 NDUFB6O95139 128 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 PIPP12273 146 aaPredicted RBP0.39□□□□□ -2.35
CCNL1-210ENST00000467849 SELENOWP63302 87 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 ARL11Q969Q4 196 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 TSC22D3Q99576 134 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 RPRMQ9NS64 109 aa0.39□□□□□ -2.35
CCNL1-210ENST00000467849 ANKARQ7Z5J8 1434 aa0.38□□□□□ -2.35
CCNL1-210ENST00000467849 CCNB3Q8WWL7 1395 aa0.38□□□□□ -2.35
CCNL1-210ENST00000467849 GNG7O60262 68 aa0.38□□□□□ -2.35
CCNL1-210ENST00000467849 CBLN1P23435 193 aa0.38□□□□□ -2.35
CCNL1-210ENST00000467849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.38□□□□□ -2.35
CCNL1-210ENST00000467849 FAM92AA1XBS5 289 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 IFNA17P01571 189 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 HIST1H1DP16402 221 aaKnown RBP0.37□□□□□ -2.35
CCNL1-210ENST00000467849 S100A7L2Q5SY68 101 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 FAM74A4Q5TZK3 123 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 RPL7L1Q6DKI1 246 aaKnown RBP0.37□□□□□ -2.35
CCNL1-210ENST00000467849 LSM10Q969L4 123 aaKnown RBP0.37□□□□□ -2.35
CCNL1-210ENST00000467849 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 PDCD10Q9BUL8 212 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 BPESC1Q9GZL8 116 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 AGPAT4-IT1Q9H0P7 198 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 V9GYV3 84 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 ANKRD36CQ5JPF3 1778 aa0.37□□□□□ -2.35
CCNL1-210ENST00000467849 TRBV7-1A0A0A6YYK4 115 aa0.36□□□□□ -2.35
CCNL1-210ENST00000467849 F2Z2F3 143 aa0.36□□□□□ -2.35
CCNL1-210ENST00000467849 SNCGO76070 127 aa0.36□□□□□ -2.35
CCNL1-210ENST00000467849 ZNF818PQ6ZRF7 136 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms