RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DEFA5Q01523 94 aa0.74□□□□□ -2.29
CDC42BPA-211ENST00000466538 C18orf32Q8TCD1 76 aa0.74□□□□□ -2.29
CDC42BPA-211ENST00000466538 PRO0255Q9UI72 69 aa0.74□□□□□ -2.29
CDC42BPA-211ENST00000466538 MAGI3Q5TCQ9 1506 aa0.74□□□□□ -2.29
CDC42BPA-211ENST00000466538 UMAD1C9J7I0 102 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 RPL38P63173 70 aaKnown RBP0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 Q5BKY6 102 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 ATP5EP2Q5VTU8 51 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 USMG5Q96IX5 58 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 CRIPTQ9P021 101 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 UBR4Q5T4S7 5183 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
CDC42BPA-211ENST00000466538 LRRC37AA6NMS7 1700 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 DOT1LQ8TEK3 1739 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 SETBP1Q9Y6X0 1596 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 FAM208BQ5VWN6 2430 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 Q8IZM0 81 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 WFDC9Q8NEX5 89 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 GAFA1Q96PS6 74 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 BCORQ6W2J9 1755 aa0.72□□□□□ -2.29
CDC42BPA-211ENST00000466538 MADDQ8WXG6 1647 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 LRRC7Q96NW7 1537 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 SPTY2D1-AS1A0A0U1RR47 76 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 I3L3M4 83 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 COX8AP10176 69 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 TIAM2Q8IVF5 1701 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 ANKRD17O75179 2603 aaKnown RBP0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 CLIP1P30622 1438 aa0.71□□□□□ -2.3
CDC42BPA-211ENST00000466538 COL14A1Q05707 1796 aaKnown RBP0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 WIZO95785 1651 aa0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 CFAP43Q8NDM7 1665 aa0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 NKTRP30414 1462 aaKnown RBP0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 IFI27P40305 119 aaPredicted RBP0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 DEFB123Q8N688 67 aa0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 CICQ96RK0 1608 aaPredicted RBP0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 EIF2AK4Q9P2K8 1649 aaKnown RBP0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 TRANK1O15050 2925 aa0.7□□□□□ -2.3
CDC42BPA-211ENST00000466538 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 ERICH3Q5RHP9 1530 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 MROH1Q8NDA8 1641 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 BIVM-ERCC5R4GMW8 1640 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 TRAV21A0A0B4J279 112 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 TEP1Q99973 2627 aaKnown RBP0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 PLCE1Q9P212 2302 aa0.69□□□□□ -2.3
CDC42BPA-211ENST00000466538 H3BVH4 76 aa0.68□□□□□ -2.3
CDC42BPA-211ENST00000466538 COX7BP24311 80 aa0.68□□□□□ -2.3
CDC42BPA-211ENST00000466538 TSC2P49815 1807 aa0.68□□□□□ -2.3
CDC42BPA-211ENST00000466538 PLCH1Q4KWH8 1693 aa0.68□□□□□ -2.3
CDC42BPA-211ENST00000466538 ABCA9Q8IUA7 1624 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 CDC42BPGQ6DT37 1551 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 INO80Q9ULG1 1556 aaPredicted RBP0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 SMIM31A0A1B0GVY4 71 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 COX6B1P14854 86 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 HMGA1P17096 107 aaKnown RBP0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 DOPEY2Q9Y3R5 2298 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
CDC42BPA-211ENST00000466538 CACNA1HO95180 2353 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 F8P00451 2351 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 LCE6AA0A183 80 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 K7EQZ3 153 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 IFI6P09912 130 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 SPINK6Q6UWN8 80 aa0.66□□□□□ -2.3
CDC42BPA-211ENST00000466538 SYNE2Q8WXH0 6885 aaKnown RBP0.65□□□□□ -2.3
CDC42BPA-211ENST00000466538 ASXL1Q8IXJ9 1541 aa0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 MAST4O15021 2626 aa0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 CPSF4LA6NMK7 179 aaKnown RBP0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 HEPN1Q6WQI6 88 aa0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 GNG13Q9P2W3 67 aa0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 SETXQ7Z333 2677 aaKnown RBP0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 UBR3Q6ZT12 1888 aa0.65□□□□□ -2.31
CDC42BPA-211ENST00000466538 DUOX2Q9NRD8 1548 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 CCL22O00626 93 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 NREPQ16612 68 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 FXYD6Q9H0Q3 95 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 PREX1Q8TCU6 1659 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
CDC42BPA-211ENST00000466538 SETD2Q9BYW2 2564 aaPredicted RBP0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 SPINK4O60575 86 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 Q5VSD8 79 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 NRAPQ86VF7 1730 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 EFCAB5A4FU69 1503 aa0.63□□□□□ -2.31
CDC42BPA-211ENST00000466538 NHSQ6T4R5 1651 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 VWFP04275 2813 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 FRAS1Q86XX4 4008 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 ABCA2Q9BZC7 2435 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 SPINK1P00995 79 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 ATXN8Q156A1 80 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 MRPL34Q9BQ48 92 aaKnown RBP0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 USP9XQ93008 2570 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms