RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 H3BNG1 76 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 FAUP35544 74 aaKnown RBP-0.35□□□□□ -2.47
SSB-207ENST00000465871 C9orf62Q8N4C0 152 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 SERP2Q8N6R1 65 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 MRPL34Q9BQ48 92 aaKnown RBP-0.35□□□□□ -2.47
SSB-207ENST00000465871 ANKRD36BQ8N2N9 1353 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 NKTRP30414 1462 aaKnown RBP-0.35□□□□□ -2.47
SSB-207ENST00000465871 CHD1O14646 1710 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 ABCA3Q99758 1704 aa-0.35□□□□□ -2.47
SSB-207ENST00000465871 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
SSB-207ENST00000465871 PCNX1Q96RV3 2341 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 TOPAZ1Q8N9V7 1692 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 EDC4Q6P2E9 1401 aaKnown RBP-0.36□□□□□ -2.47
SSB-207ENST00000465871 ZFYVE16Q7Z3T8 1539 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 SPTY2D1-AS1A0A0U1RR47 76 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 D6R8Y8 96 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 LEPROTL1O95214 131 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 LINC00032P0C843 101 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 MUSTN1Q8IVN3 82 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
SSB-207ENST00000465871 NBPF19A0A087WUL8 3843 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 UQCRHLA0A096LP55 91 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 K7EP34 96 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 RBP2P50120 134 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 KRTAP6-2Q3LI66 62 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 ZNF720Q7Z2F6 126 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 PAPPA2Q9BXP8 1791 aa-0.37□□□□□ -2.47
SSB-207ENST00000465871 NCOA3Q9Y6Q9 1424 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 SLIT1O75093 1534 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 PRDM15P57071 1507 aaPredicted RBP-0.38□□□□□ -2.47
SSB-207ENST00000465871 ANKRD36A6QL64 1941 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
SSB-207ENST00000465871 MXRA5Q9NR99 2828 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 CCL22O00626 93 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 ETDBQ3ZM63 59 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 DPY30Q9C005 99 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 PSENENQ9NZ42 101 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 CDKN2A-AS1Q9UH64 79 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 RAPGEF2Q9Y4G8 1499 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 SVEP1Q4LDE5 3571 aa-0.38□□□□□ -2.47
SSB-207ENST00000465871 SETD2Q9BYW2 2564 aaPredicted RBP-0.39□□□□□ -2.47
SSB-207ENST00000465871 REV3LO60673 3130 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 F8WEM9 126 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 IGLC2P0DOY2 106 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 IGLC3P0DOY3 106 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 HMGN3Q15651 99 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 NCMAPQ5T1S8 102 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 HERC1Q15751 4861 aa-0.39□□□□□ -2.47
SSB-207ENST00000465871 NRXN1Q9ULB1 1477 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 C9orf92A6NGG3 77 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 LELP1Q5T871 98 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 ALKAL2Q6UX46 152 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 ACBD7Q8N6N7 88 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 TARBP1Q13395 1621 aaKnown RBP-0.4□□□□□ -2.47
SSB-207ENST00000465871 ABCC2Q92887 1545 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 CLIP1P30622 1438 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 CNTLNQ9NXG0 1405 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 ANKRD50Q9ULJ7 1429 aa-0.4□□□□□ -2.47
SSB-207ENST00000465871 KMT2CQ8NEZ4 4911 aaKnown RBP-0.4□□□□□ -2.47
SSB-207ENST00000465871 LRRC37AA6NMS7 1700 aa-0.41□□□□□ -2.47
SSB-207ENST00000465871 NMSQ5H8A3 153 aa-0.41□□□□□ -2.48
SSB-207ENST00000465871 WFDC13Q8IUB5 93 aa-0.41□□□□□ -2.48
SSB-207ENST00000465871 HIGD1BQ9P298 99 aa-0.41□□□□□ -2.48
SSB-207ENST00000465871 SPG11Q96JI7 2443 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 KNL1Q8NG31 2342 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 CUX1P39880 1505 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 M0R143 59 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 MT1AP04731 61 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 SPRR2FQ96RM1 72 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 MON2Q7Z3U7 1717 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 AKAP9Q99996 3911 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 FYCO1Q9BQS8 1478 aa-0.42□□□□□ -2.48
SSB-207ENST00000465871 HIVEP1P15822 2718 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 SPTBN4Q9H254 2564 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 EPG5Q9HCE0 2579 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 SHPRHQ149N8 1683 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 DOPEY1Q5JWR5 2465 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 SAMD9Q5K651 1589 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 TRANK1O15050 2925 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 FAT1Q14517 4588 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 TEX14Q8IWB6 1497 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 ACACAQ13085 2346 aa-0.43□□□□□ -2.48
SSB-207ENST00000465871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.43□□□□□ -2.483e-10■■■■■ 30.5
SSB-207ENST00000465871 FASNP49327 2511 aaKnown RBP-0.43□□□□□ -2.48
SSB-207ENST00000465871 PRRC2CQ9Y520 2896 aaKnown RBP-0.43□□□□□ -2.48
SSB-207ENST00000465871 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
SSB-207ENST00000465871 DEFB1P60022 68 aa-0.44□□□□□ -2.48
SSB-207ENST00000465871 DEFB110Q30KQ9 67 aa-0.44□□□□□ -2.48
SSB-207ENST00000465871 C5P01031 1676 aa-0.44□□□□□ -2.48
SSB-207ENST00000465871 COL14A1Q05707 1796 aaKnown RBP-0.45□□□□□ -2.48
SSB-207ENST00000465871 TROQ12816 1431 aaPredicted RBP-0.45□□□□□ -2.48
SSB-207ENST00000465871 SMIM11AP58511 58 aa-0.45□□□□□ -2.48
SSB-207ENST00000465871 RPL38P63173 70 aaKnown RBP-0.45□□□□□ -2.48
SSB-207ENST00000465871 NBASA2RRP1 2371 aa-0.45□□□□□ -2.48
SSB-207ENST00000465871 KIF20BQ96Q89 1820 aa-0.45□□□□□ -2.48
SSB-207ENST00000465871 AKAP13Q12802 2813 aa-0.46□□□□□ -2.48
SSB-207ENST00000465871 COX7BP24311 80 aa-0.46□□□□□ -2.48
SSB-207ENST00000465871 UBE2D4Q9Y2X8 147 aa-0.46□□□□□ -2.48
SSB-207ENST00000465871 ITPR3Q14573 2671 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms