RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CEND1Q8N111 149 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 HIST1H4GQ99525 98 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 TLX1NBP0CAT3 122 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 PTTG1IPP53801 180 aa11.03□□□□□ -0.64
PTPRU-206ENST00000465525 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
PTPRU-206ENST00000465525 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
PTPRU-206ENST00000465525 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
PTPRU-206ENST00000465525 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
PTPRU-206ENST00000465525 C16orf90A8MZG2 172 aa11□□□□□ -0.65
PTPRU-206ENST00000465525 PANO1I0J062 215 aa11□□□□□ -0.65
PTPRU-206ENST00000465525 FXYD2P54710 66 aa10.99□□□□□ -0.65
PTPRU-206ENST00000465525 VAMP3Q15836 100 aa10.99□□□□□ -0.65
PTPRU-206ENST00000465525 Q6ZVH6 145 aa10.99□□□□□ -0.65
PTPRU-206ENST00000465525 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 Q8NDZ9 215 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
PTPRU-206ENST00000465525 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 KRTAP10-1P60331 282 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 UBE2V1Q13404 147 aa10.98□□□□□ -0.65
PTPRU-206ENST00000465525 TMEM238LA0A1B0GVL6 79 aa10.97□□□□□ -0.65
PTPRU-206ENST00000465525 A6NJY4 79 aa10.97□□□□□ -0.65
PTPRU-206ENST00000465525 PKHD1P08F94 4074 aa10.97□□□□□ -0.65
PTPRU-206ENST00000465525 PRR3P79522 188 aaKnown RBP10.96□□□□□ -0.65
PTPRU-206ENST00000465525 IFITM1P13164 125 aa10.95□□□□□ -0.66
PTPRU-206ENST00000465525 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
PTPRU-206ENST00000465525 FAM19A5Q7Z5A7 132 aaPredicted RBP10.95□□□□□ -0.66
PTPRU-206ENST00000465525 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
PTPRU-206ENST00000465525 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
PTPRU-206ENST00000465525 A4D1N5 150 aa10.93□□□□□ -0.66
PTPRU-206ENST00000465525 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
PTPRU-206ENST00000465525 FAM30AQ9NZY2 134 aa10.93□□□□□ -0.66
PTPRU-206ENST00000465525 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 NCR3O14931 201 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 SPACA4Q8TDM5 124 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
PTPRU-206ENST00000465525 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 H3BUT2 72 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
PTPRU-206ENST00000465525 COPS9Q8WXC6 57 aa10.92□□□□□ -0.66
PTPRU-206ENST00000465525 VPREB1P12018 145 aa10.91□□□□□ -0.66
PTPRU-206ENST00000465525 GTF2H5Q6ZYL4 71 aa10.91□□□□□ -0.66
PTPRU-206ENST00000465525 HAMPP81172 84 aa10.9□□□□□ -0.66
PTPRU-206ENST00000465525 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
PTPRU-206ENST00000465525 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
PTPRU-206ENST00000465525 IGKV2-28A0A075B6P5 120 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 A0A087WYN8 130 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 A0A1W2PPM0 123 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 IGKV2D-28P01615 120 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 FABP2P12104 132 aa10.89□□□□□ -0.67
PTPRU-206ENST00000465525 K7ERJ3 54 aa10.88□□□□□ -0.67
PTPRU-206ENST00000465525 Q6ZSA8 131 aa10.88□□□□□ -0.67
PTPRU-206ENST00000465525 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
PTPRU-206ENST00000465525 PPDPFQ9H3Y8 114 aa10.87□□□□□ -0.67
PTPRU-206ENST00000465525 PLA2G2DQ9UNK4 145 aa10.87□□□□□ -0.67
PTPRU-206ENST00000465525 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
PTPRU-206ENST00000465525 NDUFC2O95298 119 aa10.86□□□□□ -0.67
PTPRU-206ENST00000465525 K7EP34 96 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 M0QXV9 152 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 CFC1BP0CG36 223 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 CFC1P0CG37 223 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 C22orf24Q9Y442 160 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
PTPRU-206ENST00000465525 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
PTPRU-206ENST00000465525 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
PTPRU-206ENST00000465525 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
PTPRU-206ENST00000465525 IGLV5-37A0A075B6J1 123 aa10.83□□□□□ -0.68
PTPRU-206ENST00000465525 OR13C6PQ8NH95 151 aa10.83□□□□□ -0.68
PTPRU-206ENST00000465525 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
PTPRU-206ENST00000465525 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 SCXQ7RTU7 201 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 RPL37AP8A6NKH3 93 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 M0R378 163 aa10.82□□□□□ -0.68
PTPRU-206ENST00000465525 MRPL55Q7Z7F7 128 aaKnown RBP10.82□□□□□ -0.68
PTPRU-206ENST00000465525 LINC00167Q96N53 147 aa10.81□□□□□ -0.68
PTPRU-206ENST00000465525 TRBV10-3A0A0K0K1G6 114 aa10.8□□□□□ -0.68
PTPRU-206ENST00000465525 H7C2G1 150 aa10.8□□□□□ -0.68
PTPRU-206ENST00000465525 S100A7L2Q5SY68 101 aa10.8□□□□□ -0.68
PTPRU-206ENST00000465525 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
PTPRU-206ENST00000465525 TRBV10-2A0A0K0K1G8 114 aa10.79□□□□□ -0.68
PTPRU-206ENST00000465525 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
PTPRU-206ENST00000465525 XGP55808 180 aa10.79□□□□□ -0.68
PTPRU-206ENST00000465525 LYRM7Q5U5X0 104 aa10.79□□□□□ -0.68
PTPRU-206ENST00000465525 PRO1854Q9UHT4 67 aa10.79□□□□□ -0.68
PTPRU-206ENST00000465525 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
PTPRU-206ENST00000465525 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
PTPRU-206ENST00000465525 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
PTPRU-206ENST00000465525 TRAV13-2A0A0B4J235 113 aa10.77□□□□□ -0.69
PTPRU-206ENST00000465525 IGLV6-57P01721 117 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms