RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 SMIM13P0DJ93 91 aa8.67□□□□□ -1.02
UBA3-207ENST00000465108 UBE2BP63146 152 aa8.67□□□□□ -1.02
UBA3-207ENST00000465108 FAT1Q14517 4588 aa8.67□□□□□ -1.02
UBA3-207ENST00000465108 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
UBA3-207ENST00000465108 E9PLD3 99 aa8.66□□□□□ -1.02
UBA3-207ENST00000465108 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
UBA3-207ENST00000465108 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
UBA3-207ENST00000465108 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
UBA3-207ENST00000465108 NMUP48645 174 aa8.65□□□□□ -1.02
UBA3-207ENST00000465108 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
UBA3-207ENST00000465108 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
UBA3-207ENST00000465108 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
UBA3-207ENST00000465108 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
UBA3-207ENST00000465108 AKR1D1P51857 326 aa8.63□□□□□ -1.03
UBA3-207ENST00000465108 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
UBA3-207ENST00000465108 LBHQ53QV2 105 aaPredicted RBP8.63□□□□□ -1.03
UBA3-207ENST00000465108 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
UBA3-207ENST00000465108 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
UBA3-207ENST00000465108 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
UBA3-207ENST00000465108 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
UBA3-207ENST00000465108 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
UBA3-207ENST00000465108 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
UBA3-207ENST00000465108 IGKV2D-26A0A0A0MRZ7 120 aa8.61□□□□□ -1.03
UBA3-207ENST00000465108 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
UBA3-207ENST00000465108 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
UBA3-207ENST00000465108 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
UBA3-207ENST00000465108 DAND5Q8N907 189 aa8.61□□□□□ -1.03
UBA3-207ENST00000465108 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
UBA3-207ENST00000465108 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
UBA3-207ENST00000465108 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
UBA3-207ENST00000465108 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
UBA3-207ENST00000465108 SCGB1D1O95968 90 aa8.6□□□□□ -1.03
UBA3-207ENST00000465108 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
UBA3-207ENST00000465108 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
UBA3-207ENST00000465108 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
UBA3-207ENST00000465108 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
UBA3-207ENST00000465108 IGLV5-37A0A075B6J1 123 aa8.58□□□□□ -1.04
UBA3-207ENST00000465108 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
UBA3-207ENST00000465108 VPREB1P12018 145 aa8.58□□□□□ -1.04
UBA3-207ENST00000465108 NPC2P61916 151 aa8.57□□□□□ -1.04
UBA3-207ENST00000465108 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
UBA3-207ENST00000465108 Q8NDZ9 215 aa8.56□□□□□ -1.04
UBA3-207ENST00000465108 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
UBA3-207ENST00000465108 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
UBA3-207ENST00000465108 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
UBA3-207ENST00000465108 XP32Q5T750 250 aa8.55□□□□□ -1.04
UBA3-207ENST00000465108 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
UBA3-207ENST00000465108 NCR3O14931 201 aa8.54□□□□□ -1.04
UBA3-207ENST00000465108 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
UBA3-207ENST00000465108 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
UBA3-207ENST00000465108 PCLOQ9Y6V0 5065 aa8.54□□□□□ -1.04
UBA3-207ENST00000465108 M0R378 163 aa8.53□□□□□ -1.04
UBA3-207ENST00000465108 PCP2Q8IVA1 136 aa8.53□□□□□ -1.04
UBA3-207ENST00000465108 TIMM17BO60830 172 aa8.52□□□□□ -1.05
UBA3-207ENST00000465108 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
UBA3-207ENST00000465108 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
UBA3-207ENST00000465108 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
UBA3-207ENST00000465108 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
UBA3-207ENST00000465108 LITAFQ99732 161 aa8.5□□□□□ -1.05
UBA3-207ENST00000465108 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
UBA3-207ENST00000465108 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
UBA3-207ENST00000465108 BCE1O60756 84 aa8.49□□□□□ -1.05
UBA3-207ENST00000465108 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
UBA3-207ENST00000465108 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
UBA3-207ENST00000465108 UBE2AP49459 152 aa8.48□□□□□ -1.05
UBA3-207ENST00000465108 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
UBA3-207ENST00000465108 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
UBA3-207ENST00000465108 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 ZNF861PO60384 105 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 OXTP01178 125 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
UBA3-207ENST00000465108 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
UBA3-207ENST00000465108 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
UBA3-207ENST00000465108 SPANXB1Q9NS25 103 aaPredicted RBP8.46□□□□□ -1.06
UBA3-207ENST00000465108 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
UBA3-207ENST00000465108 NDUFC2O95298 119 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 DDTP30046 118 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 S100A12P80511 92 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 PAM16Q9Y3D7 125 aa8.45□□□□□ -1.06
UBA3-207ENST00000465108 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
UBA3-207ENST00000465108 H0Y9J4 135 aa8.44□□□□□ -1.06
UBA3-207ENST00000465108 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
UBA3-207ENST00000465108 VAMP8Q9BV40 100 aa8.44□□□□□ -1.06
UBA3-207ENST00000465108 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
UBA3-207ENST00000465108 PRYO14603 147 aa8.43□□□□□ -1.06
UBA3-207ENST00000465108 PRLHP81277 87 aa8.43□□□□□ -1.06
UBA3-207ENST00000465108 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
UBA3-207ENST00000465108 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
UBA3-207ENST00000465108 IFITM1P13164 125 aa8.42□□□□□ -1.06
UBA3-207ENST00000465108 Q6ZVH6 145 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms