RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 DNAH3Q8TD57 4116 aa12.59□□□□□ -0.39
TSPAN4-210ENST00000464987 NDUFC2O95298 119 aa12.59□□□□□ -0.39
TSPAN4-210ENST00000464987 C14orf132Q9NPU4 83 aa12.56□□□□□ -0.4
TSPAN4-210ENST00000464987 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
TSPAN4-210ENST00000464987 ACYP1P07311 99 aa12.55□□□□□ -0.4
TSPAN4-210ENST00000464987 EGFEM1PQ0D2K5 195 aa12.55□□□□□ -0.4
TSPAN4-210ENST00000464987 TRBV7-7A0A0K0K1E9 115 aa12.54□□□□□ -0.4
TSPAN4-210ENST00000464987 A0A0J9YWU9 116 aa12.54□□□□□ -0.4
TSPAN4-210ENST00000464987 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
TSPAN4-210ENST00000464987 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
TSPAN4-210ENST00000464987 C6orf99Q4VX62 202 aa12.52□□□□□ -0.41
TSPAN4-210ENST00000464987 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
TSPAN4-210ENST00000464987 ESRGQ1W209 222 aa12.52□□□□□ -0.41
TSPAN4-210ENST00000464987 OBSCN-AS1Q96MR7 158 aa12.52□□□□□ -0.41
TSPAN4-210ENST00000464987 HIGD2BQ4VC39 106 aa12.51□□□□□ -0.41
TSPAN4-210ENST00000464987 Q8N814 137 aa12.51□□□□□ -0.41
TSPAN4-210ENST00000464987 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
TSPAN4-210ENST00000464987 H3BNG1 76 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 S100A7L2Q5SY68 101 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 C5orf47Q569G3 176 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 KRTAP26-1Q6PEX3 210 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
TSPAN4-210ENST00000464987 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-210ENST00000464987 LINC00167Q96N53 147 aa12.49□□□□□ -0.41
TSPAN4-210ENST00000464987 IMUPQ9GZP8 106 aa12.47□□□□□ -0.41
TSPAN4-210ENST00000464987 GVQW2A0A096LPI5 108 aaPredicted RBP12.46□□□□□ -0.41
TSPAN4-210ENST00000464987 LINC00643Q86TS7 51 aa12.46□□□□□ -0.42
TSPAN4-210ENST00000464987 KRTAP21-3Q3LHN1 58 aa12.45□□□□□ -0.42
TSPAN4-210ENST00000464987 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
TSPAN4-210ENST00000464987 PRB2P02812 416 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-210ENST00000464987 A0A1B0GX51 115 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 ZNF561-AS1K7EIQ3 104 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 C15orf56Q8N910 161 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 C3orf22Q8N5N4 141 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 MUC7Q8TAX7 377 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 CAMK2N2Q96S95 79 aa12.43□□□□□ -0.42
TSPAN4-210ENST00000464987 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
TSPAN4-210ENST00000464987 Q6ZRU5 148 aa12.42□□□□□ -0.42
TSPAN4-210ENST00000464987 LINC00846Q9NV44 126 aa12.42□□□□□ -0.42
TSPAN4-210ENST00000464987 TRBV10-3A0A0K0K1G6 114 aa12.41□□□□□ -0.42
TSPAN4-210ENST00000464987 FAM236AA0A1B0GUQ0 79 aa12.41□□□□□ -0.42
TSPAN4-210ENST00000464987 FAM236BA0A1B0GV22 79 aa12.41□□□□□ -0.42
TSPAN4-210ENST00000464987 UQCRQO14949 82 aa12.41□□□□□ -0.42
TSPAN4-210ENST00000464987 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
TSPAN4-210ENST00000464987 HUWE1Q7Z6Z7 4374 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-210ENST00000464987 COL6A5A8TX70 2615 aa12.39□□□□□ -0.43
TSPAN4-210ENST00000464987 TMEM256-PLSCR3K7ERE1 68 aa12.39□□□□□ -0.43
TSPAN4-210ENST00000464987 IGKV2D-24A0A075B6R9 120 aa12.38□□□□□ -0.43
TSPAN4-210ENST00000464987 J3KT08 172 aa12.38□□□□□ -0.43
TSPAN4-210ENST00000464987 LINC01556Q5JQF7 62 aa12.37□□□□□ -0.43
TSPAN4-210ENST00000464987 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
TSPAN4-210ENST00000464987 LOC107984640A0A0U1RRK4 108 aa12.37□□□□□ -0.43
TSPAN4-210ENST00000464987 hADV29S1A0JD25 119 aa12.37□□□□□ -0.43
TSPAN4-210ENST00000464987 NBEAL1Q6ZS30 2694 aa12.36□□□□□ -0.43
TSPAN4-210ENST00000464987 RPS28P62857 69 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-210ENST00000464987 TRAV23DV6A0A075B6W5 121 aa12.35□□□□□ -0.43
TSPAN4-210ENST00000464987 FAM19A5Q7Z5A7 132 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-210ENST00000464987 DNAH1Q9P2D7 4330 aa12.34□□□□□ -0.43
TSPAN4-210ENST00000464987 CCKP06307 115 aa12.34□□□□□ -0.43
TSPAN4-210ENST00000464987 VPREB1P12018 145 aa12.34□□□□□ -0.43
TSPAN4-210ENST00000464987 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
TSPAN4-210ENST00000464987 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
TSPAN4-210ENST00000464987 Q6ZRP5 223 aa12.32□□□□□ -0.44
TSPAN4-210ENST00000464987 Q6ZQY7 126 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 MRAPQ8TCY5 172 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 LYSTQ99698 3801 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 DIRC1Q969H9 104 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
TSPAN4-210ENST00000464987 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-210ENST00000464987 COX7CP15954 63 aa12.3□□□□□ -0.44
TSPAN4-210ENST00000464987 CRYGAP11844 174 aa12.29□□□□□ -0.44
TSPAN4-210ENST00000464987 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
TSPAN4-210ENST00000464987 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
TSPAN4-210ENST00000464987 MDFIQ99750 246 aa12.28□□□□□ -0.44
TSPAN4-210ENST00000464987 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.45
TSPAN4-210ENST00000464987 M0R2N4 97 aa12.26□□□□□ -0.45
TSPAN4-210ENST00000464987 CASC10Q5T4H9 136 aa12.26□□□□□ -0.45
TSPAN4-210ENST00000464987 Q6JHZ5 121 aa12.26□□□□□ -0.45
TSPAN4-210ENST00000464987 K7EIL1 84 aa12.26□□□□□ -0.45
TSPAN4-210ENST00000464987 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
TSPAN4-210ENST00000464987 A0A087WVE0 104 aa12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 TRAV10A0A0B4J240 114 aa12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 M0R378 163 aa12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 COX7BP24311 80 aa12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 ELOF1P60002 83 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 HIST1H4AP62805 103 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 RBM3P98179 157 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
TSPAN4-210ENST00000464987 Q6ZQT0 140 aa12.23□□□□□ -0.45
TSPAN4-210ENST00000464987 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.45
TSPAN4-210ENST00000464987 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
TSPAN4-210ENST00000464987 ATOX1O00244 68 aa12.2□□□□□ -0.46
TSPAN4-210ENST00000464987 COL7A1Q02388 2944 aa12.19□□□□□ -0.46
TSPAN4-210ENST00000464987 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
TSPAN4-210ENST00000464987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms