RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 A0A096LPF7 62 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 TRBV7-6A0A0J9YX20 115 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 SPATA3Q8NHX4 192 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
USP48-206ENST00000464577 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 C2CD3Q4AC94 2353 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 NOTCH3Q9UM47 2321 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 CYSRT1A8MQ03 144 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 ERC2-IT1O76042 136 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 RMI2Q96E14 147 aa4.92□□□□□ -1.62
USP48-206ENST00000464577 NCOR2Q9Y618 2525 aa4.91□□□□□ -1.62
USP48-206ENST00000464577 USP9YO00507 2555 aaPredicted RBP4.91□□□□□ -1.62
USP48-206ENST00000464577 USP9XQ93008 2570 aaPredicted RBP4.91□□□□□ -1.62
USP48-206ENST00000464577 F8WEM9 126 aa4.91□□□□□ -1.62
USP48-206ENST00000464577 COX7BP24311 80 aa4.91□□□□□ -1.62
USP48-206ENST00000464577 ZNF73O43830 326 aaPredicted RBP4.9□□□□□ -1.62
USP48-206ENST00000464577 ELOF1P60002 83 aaKnown RBP4.9□□□□□ -1.62
USP48-206ENST00000464577 PRR34Q9NV39 138 aa4.9□□□□□ -1.62
USP48-206ENST00000464577 SNURFQ9Y675 71 aa4.9□□□□□ -1.62
USP48-206ENST00000464577 ZANQ9Y493 2812 aa4.9□□□□□ -1.62
USP48-206ENST00000464577 CHD8Q9HCK8 2581 aa4.9□□□□□ -1.63
USP48-206ENST00000464577 LELP1Q5T871 98 aa4.9□□□□□ -1.63
USP48-206ENST00000464577 FBN2P35556 2912 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 MIFP14174 115 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 NREPQ16612 68 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 CHD6Q8TD26 2715 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 MYO9AB2RTY4 2548 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 CFAP46Q8IYW2 2715 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 PKD1L2Q7Z442 2459 aa4.89□□□□□ -1.63
USP48-206ENST00000464577 C6orf48Q9UBA6 75 aa4.88□□□□□ -1.63
USP48-206ENST00000464577 MAP1AP78559 2803 aaPredicted RBP4.88□□□□□ -1.63
USP48-206ENST00000464577 SETXQ7Z333 2677 aaKnown RBP4.88□□□□□ -1.63
USP48-206ENST00000464577 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
USP48-206ENST00000464577 BPY2O14599 106 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 VPREB1P12018 145 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 DAD1P61803 113 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 TMEM254Q8TBM7 123 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 CELA1Q9UNI1 258 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 FLNCQ14315 2725 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 M0R378 163 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 SCXQ7RTU7 201 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 WFDC11Q8NEX6 87 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 WNK1Q9H4A3 2382 aa4.87□□□□□ -1.63
USP48-206ENST00000464577 SPTBN4Q9H254 2564 aa4.86□□□□□ -1.63
USP48-206ENST00000464577 IGKV4-1P06312 121 aa4.86□□□□□ -1.63
USP48-206ENST00000464577 LINC00336Q6ZUF6 198 aa4.86□□□□□ -1.63
USP48-206ENST00000464577 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
USP48-206ENST00000464577 AKAP9Q99996 3911 aa4.86□□□□□ -1.63
USP48-206ENST00000464577 KRTAP1-1Q07627 177 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
USP48-206ENST00000464577 TLN2Q9Y4G6 2542 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 A0A0U1RQV1 116 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 APOC4P55056 127 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 EGFEM1PQ0D2K5 195 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 POLQO75417 2590 aa4.85□□□□□ -1.63
USP48-206ENST00000464577 DEFB135Q30KP9 77 aa4.84□□□□□ -1.63
USP48-206ENST00000464577 TEX15Q9BXT5 2789 aa4.84□□□□□ -1.63
USP48-206ENST00000464577 JMJD1CQ15652 2540 aa4.84□□□□□ -1.63
USP48-206ENST00000464577 NAV2Q8IVL1 2488 aa4.84□□□□□ -1.64
USP48-206ENST00000464577 PRYO14603 147 aa4.84□□□□□ -1.64
USP48-206ENST00000464577 DEFB4AO15263 64 aa4.84□□□□□ -1.64
USP48-206ENST00000464577 Q8NAQ8 132 aa4.84□□□□□ -1.64
USP48-206ENST00000464577 EPG5Q9HCE0 2579 aa4.83□□□□□ -1.64
USP48-206ENST00000464577 PRB1P04280 392 aa4.83□□□□□ -1.64
USP48-206ENST00000464577 SPART-AS1P0CW21 52 aa4.83□□□□□ -1.64
USP48-206ENST00000464577 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
USP48-206ENST00000464577 IGSF10Q6WRI0 2623 aa4.83□□□□□ -1.64
USP48-206ENST00000464577 A0A1B0GW54 56 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 KRTAP10-3P60369 221 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 C1orf43Q9BWL3 253 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 CSMD2Q7Z408 3487 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 F8WDY8 70 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 LINC00474Q9P2X8 69 aa4.82□□□□□ -1.64
USP48-206ENST00000464577 ACACBO00763 2458 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 FUSP35637 526 aaKnown RBP eCLIP4.81□□□□□ -1.64
USP48-206ENST00000464577 HIGD2BQ4VC39 106 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 KRTAP26-1Q6PEX3 210 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 PTPN13Q12923 2485 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 IGLV5-48A0A075B6I7 105 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 Q6ZRU5 148 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 Q8N9L7 120 aa4.81□□□□□ -1.64
USP48-206ENST00000464577 LRRK2Q5S007 2527 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 LCE6AA0A183 80 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 HTN3P15516 51 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 TNP2Q05952 138 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 ESRGQ1W209 222 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 MYO18BQ8IUG5 2567 aa4.8□□□□□ -1.64
USP48-206ENST00000464577 Q6ZTC4 211 aa4.79□□□□□ -1.64
USP48-206ENST00000464577 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
USP48-206ENST00000464577 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms