RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SLC25A34Q6PIV7 304 aa8.77□□□□□ -1.01
PHACTR4-203ENST00000463428 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
PHACTR4-203ENST00000463428 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 Q8NDZ9 215 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 SPANXDQ9BXN6 97 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
PHACTR4-203ENST00000463428 APOBP04114 4563 aaKnown RBP8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 HAMPP81172 84 aa8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 C2orf91Q6ZV80 131 aa8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
PHACTR4-203ENST00000463428 LINC00518Q8N0U6 118 aa8.74□□□□□ -1.01
PHACTR4-203ENST00000463428 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
PHACTR4-203ENST00000463428 C12orf57Q99622 126 aa8.74□□□□□ -1.01
PHACTR4-203ENST00000463428 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
PHACTR4-203ENST00000463428 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
PHACTR4-203ENST00000463428 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
PHACTR4-203ENST00000463428 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
PHACTR4-203ENST00000463428 VPREB1P12018 145 aa8.72□□□□□ -1.01
PHACTR4-203ENST00000463428 NPC2P61916 151 aa8.72□□□□□ -1.01
PHACTR4-203ENST00000463428 Q6ZVH6 145 aa8.72□□□□□ -1.01
PHACTR4-203ENST00000463428 FAM19A5Q7Z5A7 132 aaPredicted RBP8.71□□□□□ -1.01
PHACTR4-203ENST00000463428 PRO1933Q9H354 126 aa8.71□□□□□ -1.01
PHACTR4-203ENST00000463428 IFITM1P13164 125 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
PHACTR4-203ENST00000463428 BIRC6Q9NR09 4857 aa8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 NDUFC2O95298 119 aa8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
PHACTR4-203ENST00000463428 M0QXV9 152 aa8.68□□□□□ -1.02
PHACTR4-203ENST00000463428 RYR1P21817 5038 aa8.67□□□□□ -1.02
PHACTR4-203ENST00000463428 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
PHACTR4-203ENST00000463428 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
PHACTR4-203ENST00000463428 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
PHACTR4-203ENST00000463428 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
PHACTR4-203ENST00000463428 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
PHACTR4-203ENST00000463428 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 TAL2Q16559 108 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 LINC00167Q96N53 147 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 HSPG2P98160 4391 aa8.65□□□□□ -1.02
PHACTR4-203ENST00000463428 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
PHACTR4-203ENST00000463428 M0R378 163 aa8.64□□□□□ -1.03
PHACTR4-203ENST00000463428 NCR3O14931 201 aa8.64□□□□□ -1.03
PHACTR4-203ENST00000463428 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
PHACTR4-203ENST00000463428 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
PHACTR4-203ENST00000463428 LBHQ53QV2 105 aaPredicted RBP8.63□□□□□ -1.03
PHACTR4-203ENST00000463428 A4D1N5 150 aa8.63□□□□□ -1.03
PHACTR4-203ENST00000463428 GAGE10A6NGK3 116 aa8.63□□□□□ -1.03
PHACTR4-203ENST00000463428 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
PHACTR4-203ENST00000463428 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
PHACTR4-203ENST00000463428 TSTD3H0UI37 97 aa8.62□□□□□ -1.03
PHACTR4-203ENST00000463428 HSD52Q0P140 79 aa8.62□□□□□ -1.03
PHACTR4-203ENST00000463428 CEND1Q8N111 149 aa8.62□□□□□ -1.03
PHACTR4-203ENST00000463428 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
PHACTR4-203ENST00000463428 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
PHACTR4-203ENST00000463428 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
PHACTR4-203ENST00000463428 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
PHACTR4-203ENST00000463428 TRBV10-3A0A0K0K1G6 114 aa8.59□□□□□ -1.03
PHACTR4-203ENST00000463428 UBE2BP63146 152 aa8.59□□□□□ -1.03
PHACTR4-203ENST00000463428 FXYD2P54710 66 aa8.58□□□□□ -1.04
PHACTR4-203ENST00000463428 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
PHACTR4-203ENST00000463428 FAT1Q14517 4588 aa8.58□□□□□ -1.04
PHACTR4-203ENST00000463428 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 CFC1P0CG37 223 aa8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 DDTP30046 118 aa8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 KRTAP10-4P60372 401 aaPredicted RBP8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 CTAG1AP78358 180 aa8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
PHACTR4-203ENST00000463428 KCNQ1DNQ9H478 68 aa8.56□□□□□ -1.04
PHACTR4-203ENST00000463428 S100A7L2Q5SY68 101 aa8.55□□□□□ -1.04
PHACTR4-203ENST00000463428 Q8N1X5 172 aa8.55□□□□□ -1.04
PHACTR4-203ENST00000463428 TMEM126AQ9H061 195 aa8.55□□□□□ -1.04
PHACTR4-203ENST00000463428 TRAV13-2A0A0B4J235 113 aa8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 SPRR1AP35321 89 aa8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 BVES-AS1Q5T3Y7 98 aa8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 PRYO14603 147 aa8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
PHACTR4-203ENST00000463428 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 A6NDN8 102 aa8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 A6NJY4 79 aa8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
PHACTR4-203ENST00000463428 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms