RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
COL6A1-202ENST00000463060 IFITM1P13164 125 aa9.13□□□□□ -0.95
COL6A1-202ENST00000463060 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
COL6A1-202ENST00000463060 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
COL6A1-202ENST00000463060 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
COL6A1-202ENST00000463060 EPM2AB3EWF7 344 aa9.12□□□□□ -0.95
COL6A1-202ENST00000463060 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
COL6A1-202ENST00000463060 Q6ZSA8 131 aa9.12□□□□□ -0.95
COL6A1-202ENST00000463060 KRTAP7-1Q8IUC3 87 aa9.12□□□□□ -0.95
COL6A1-202ENST00000463060 Q8NDZ9 215 aa9.12□□□□□ -0.95
COL6A1-202ENST00000463060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
COL6A1-202ENST00000463060 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL6A1-202ENST00000463060 TAL2Q16559 108 aa9.11□□□□□ -0.95
COL6A1-202ENST00000463060 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
COL6A1-202ENST00000463060 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
COL6A1-202ENST00000463060 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
COL6A1-202ENST00000463060 PLA2G2DQ9UNK4 145 aa9.11□□□□□ -0.95
COL6A1-202ENST00000463060 HERC2O95714 4834 aa9.1□□□□□ -0.95
COL6A1-202ENST00000463060 LRP1BQ9NZR2 4599 aa9.1□□□□□ -0.95
COL6A1-202ENST00000463060 HNRNPA3P51991 378 aaKnown RBP9.1□□□□□ -0.95
COL6A1-202ENST00000463060 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
COL6A1-202ENST00000463060 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
COL6A1-202ENST00000463060 IGKV2-24A0A0C4DH68 120 aa9.09□□□□□ -0.95
COL6A1-202ENST00000463060 NPC2P61916 151 aa9.09□□□□□ -0.95
COL6A1-202ENST00000463060 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 VPREB1P12018 145 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 DDTP30046 118 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 HSD52Q0P140 79 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 SERTAD4-AS1Q5TG53 156 aa9.08□□□□□ -0.96
COL6A1-202ENST00000463060 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
COL6A1-202ENST00000463060 NDUFC2O95298 119 aa9.07□□□□□ -0.96
COL6A1-202ENST00000463060 CTAG1AP78358 180 aa9.07□□□□□ -0.96
COL6A1-202ENST00000463060 CEND1Q8N111 149 aa9.06□□□□□ -0.96
COL6A1-202ENST00000463060 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
COL6A1-202ENST00000463060 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
COL6A1-202ENST00000463060 A0A087WYN8 130 aa9.05□□□□□ -0.96
COL6A1-202ENST00000463060 PRR3P79522 188 aaKnown RBP9.05□□□□□ -0.96
COL6A1-202ENST00000463060 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
COL6A1-202ENST00000463060 A4D1N5 150 aa9.04□□□□□ -0.96
COL6A1-202ENST00000463060 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
COL6A1-202ENST00000463060 FXYD2P54710 66 aa9.03□□□□□ -0.96
COL6A1-202ENST00000463060 RPL24P83731 157 aaKnown RBP9.03□□□□□ -0.96
COL6A1-202ENST00000463060 BVES-AS1Q5T3Y7 98 aa9.02□□□□□ -0.97
COL6A1-202ENST00000463060 C22orf24Q9Y442 160 aa9.02□□□□□ -0.97
COL6A1-202ENST00000463060 TRBV10-2A0A0K0K1G8 114 aa9.01□□□□□ -0.97
COL6A1-202ENST00000463060 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
COL6A1-202ENST00000463060 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
COL6A1-202ENST00000463060 DPH3Q96FX2 82 aa9.01□□□□□ -0.97
COL6A1-202ENST00000463060 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
COL6A1-202ENST00000463060 M0R378 163 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 CFC1BP0CG36 223 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 CFC1P0CG37 223 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 XGP55808 180 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 SCXQ7RTU7 201 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 LINC00337Q8N6G1 96 aa9□□□□□ -0.97
COL6A1-202ENST00000463060 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
COL6A1-202ENST00000463060 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
COL6A1-202ENST00000463060 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
COL6A1-202ENST00000463060 C7orf33Q8WU49 177 aa8.99□□□□□ -0.97
COL6A1-202ENST00000463060 M0QXV9 152 aa8.98□□□□□ -0.97
COL6A1-202ENST00000463060 NCR3O14931 201 aa8.98□□□□□ -0.97
COL6A1-202ENST00000463060 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
COL6A1-202ENST00000463060 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
COL6A1-202ENST00000463060 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
COL6A1-202ENST00000463060 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
COL6A1-202ENST00000463060 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
COL6A1-202ENST00000463060 A0A0B4J2C4 111 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 TMEM238LA0A1B0GVL6 79 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 A6NJY4 79 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 PCP4L1A6NKN8 68 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 M0R143 59 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
COL6A1-202ENST00000463060 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
COL6A1-202ENST00000463060 HAMPP81172 84 aa8.95□□□□□ -0.98
COL6A1-202ENST00000463060 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
COL6A1-202ENST00000463060 TRAV13-2A0A0B4J235 113 aa8.94□□□□□ -0.98
COL6A1-202ENST00000463060 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
COL6A1-202ENST00000463060 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
COL6A1-202ENST00000463060 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
COL6A1-202ENST00000463060 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
COL6A1-202ENST00000463060 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
COL6A1-202ENST00000463060 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
COL6A1-202ENST00000463060 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
COL6A1-202ENST00000463060 SNHG12Q9BXW3 62 aa8.92□□□□□ -0.98
COL6A1-202ENST00000463060 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
COL6A1-202ENST00000463060 PRO1854Q9UHT4 67 aa8.92□□□□□ -0.98
COL6A1-202ENST00000463060 RYR1P21817 5038 aa8.91□□□□□ -0.98
COL6A1-202ENST00000463060 K7ERJ3 54 aa8.91□□□□□ -0.98
COL6A1-202ENST00000463060 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
COL6A1-202ENST00000463060 A6NDN8 102 aa8.9□□□□□ -0.98
COL6A1-202ENST00000463060 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
COL6A1-202ENST00000463060 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
COL6A1-202ENST00000463060 SPRR1AP35321 89 aa8.89□□□□□ -0.99
COL6A1-202ENST00000463060 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
COL6A1-202ENST00000463060 HSPG2P98160 4391 aa8.89□□□□□ -0.99
COL6A1-202ENST00000463060 KRTAP4-16G5E9R7 235 aaPredicted RBP8.87□□□□□ -0.99
COL6A1-202ENST00000463060 PRYO14603 147 aa8.87□□□□□ -0.99
COL6A1-202ENST00000463060 UBE2BP63146 152 aa8.87□□□□□ -0.99
COL6A1-202ENST00000463060 BATFQ16520 125 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms