RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 ADGRB2O60241 1585 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 PAPPAQ13219 1627 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 USP32Q8NFA0 1604 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 PHRF1Q9P1Y6 1649 aaKnown RBP0.81□□□□□ -2.28
CNOT11-203ENST00000462489 PLCH1Q4KWH8 1693 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 ZNF831Q5JPB2 1677 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 ALS2Q96Q42 1657 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 TIAM2Q8IVF5 1701 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 IFT172Q9UG01 1749 aa0.81□□□□□ -2.28
CNOT11-203ENST00000462489 NESP48681 1621 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 NHSL1Q5SYE7 1610 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 PRH1P02810 166 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 MROH2AA6NES4 1674 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 NUP188Q5SRE5 1749 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 PKD1L3Q7Z443 1732 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 FMN2Q9NZ56 1722 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 COL14A1Q05707 1796 aaKnown RBP0.8□□□□□ -2.28
CNOT11-203ENST00000462489 ANKRD50Q9ULJ7 1429 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 COL6A6A6NMZ7 2263 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 PLCE1Q9P212 2302 aa0.8□□□□□ -2.28
CNOT11-203ENST00000462489 LRRC7Q96NW7 1537 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 SYCP2Q9BX26 1530 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 WIZO95785 1651 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 C5P01031 1676 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 NHSQ6T4R5 1651 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 BCORQ6W2J9 1755 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 GVQW2A0A096LPI5 108 aaPredicted RBP0.79□□□□□ -2.28
CNOT11-203ENST00000462489 LCE6AA0A183 80 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 G3V318 75 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 C10orf99Q6UWK7 81 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 SSBP3-AS1Q7Z2R9 100 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 SMIM11BQ8TCY0 68 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 UBL5Q9BZL1 73 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 CACNA1BQ00975 2339 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 CNOT1A5YKK6 2376 aaKnown RBP0.79□□□□□ -2.28
CNOT11-203ENST00000462489 JMJD1CQ15652 2540 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 SAMD9Q5K651 1589 aa0.79□□□□□ -2.28
CNOT11-203ENST00000462489 CACNA1EQ15878 2313 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 PAPPA2Q9BXP8 1791 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 A0A096LNT2 108 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 NDUFA4O00483 81 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 NCR3O14931 201 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 LY6G6CO95867 125 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 COX7BP24311 80 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 UNQ6190/PRO20217Q6UXQ8 127 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 Q6ZSA8 131 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 DEFB119Q8N690 84 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 NMES1Q9C002 83 aa0.78□□□□□ -2.28
CNOT11-203ENST00000462489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.78□□□□□ -2.282e-8■■■□□ 17.7
CNOT11-203ENST00000462489 ALKQ9UM73 1620 aa0.78□□□□□ -2.29
CNOT11-203ENST00000462489 CFAP43Q8NDM7 1665 aa0.78□□□□□ -2.29
CNOT11-203ENST00000462489 RICTORQ6R327 1708 aa0.78□□□□□ -2.29
CNOT11-203ENST00000462489 PARP4Q9UKK3 1724 aaKnown RBP0.78□□□□□ -2.29
CNOT11-203ENST00000462489 KMT2BQ9UMN6 2715 aaPredicted RBP0.77□□□□□ -2.29
CNOT11-203ENST00000462489 PIN1P1O15428 100 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 SPINK13Q1W4C9 94 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 CMC2Q9NRP2 79 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 EFCAB6Q5THR3 1501 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 UGGT1Q9NYU2 1555 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 PLXNB2O15031 1838 aa0.77□□□□□ -2.29
CNOT11-203ENST00000462489 LRRC37A2A6NM11 1700 aa0.76□□□□□ -2.29
CNOT11-203ENST00000462489 KIAA0556O60303 1618 aa0.76□□□□□ -2.29
CNOT11-203ENST00000462489 CICQ96RK0 1608 aaPredicted RBP0.76□□□□□ -2.29
CNOT11-203ENST00000462489 SSC5DA1L4H1 1573 aa0.76□□□□□ -2.29
CNOT11-203ENST00000462489 MAST1Q9Y2H9 1570 aa0.76□□□□□ -2.29
CNOT11-203ENST00000462489 M0R1W7 72 aa0.76□□□□□ -2.29
CNOT11-203ENST00000462489 ANKRD36CQ5JPF3 1778 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 NRAPQ86VF7 1730 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 DOT1LQ8TEK3 1739 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 E9PCH4 1651 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 CROCC2H7BZ55 1655 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 ABCA5Q8WWZ7 1642 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 BIVM-ERCC5R4GMW8 1640 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 SLIT1O75093 1534 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 ABCC6O95255 1503 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 CPSF4LA6NMK7 179 aaKnown RBP0.75□□□□□ -2.29
CNOT11-203ENST00000462489 I3L3M4 83 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 LINC00575Q6W349 94 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 CRIPTQ9P021 101 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 ABRACLQ9P1F3 81 aa0.75□□□□□ -2.29
CNOT11-203ENST00000462489 ETDCA0A1B0GVM5 59 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 PLNP26678 52 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 RPL37P61927 97 aaKnown RBP0.74□□□□□ -2.29
CNOT11-203ENST00000462489 RPL38P63173 70 aaKnown RBP0.74□□□□□ -2.29
CNOT11-203ENST00000462489 SERF2P84101 59 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 UBE2DNLQ8IWF7 75 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 TIMM8BQ9Y5J9 83 aaPredicted RBP0.74□□□□□ -2.29
CNOT11-203ENST00000462489 TJP1Q07157 1748 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 ERCC6L2Q5T890 1561 aa0.74□□□□□ -2.29
CNOT11-203ENST00000462489 POLR1AO95602 1720 aaPredicted RBP0.73□□□□□ -2.29
CNOT11-203ENST00000462489 PIEZO2Q9H5I5 2752 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 C2CD3Q4AC94 2353 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 SPTY2D1-AS1A0A0U1RR47 76 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 SMIM27A0A1W2PRY6 76 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 IGIPA6NJ69 53 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 SPINK4O60575 86 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 CRIP1P50238 77 aa0.73□□□□□ -2.29
CNOT11-203ENST00000462489 KCNQ1DNQ9H478 68 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms