RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
ERCC3-206ENST00000462306 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
ERCC3-206ENST00000462306 LINC00158P58513 81 aa9.66□□□□□ -0.86
ERCC3-206ENST00000462306 HERV-K104P63124 156 aa9.66□□□□□ -0.86
ERCC3-206ENST00000462306 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
ERCC3-206ENST00000462306 A0A0U1RRA0 63 aa9.65□□□□□ -0.86
ERCC3-206ENST00000462306 VPREB1P12018 145 aa9.65□□□□□ -0.86
ERCC3-206ENST00000462306 Q8NDZ9 215 aa9.65□□□□□ -0.86
ERCC3-206ENST00000462306 LINC01600Q96MT4 127 aa9.65□□□□□ -0.86
ERCC3-206ENST00000462306 MYMXA0A1B0GTQ4 84 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 J3QQQ9 107 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 HERVK_113P61574 105 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 LINC01545Q5VT33 79 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
ERCC3-206ENST00000462306 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
ERCC3-206ENST00000462306 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
ERCC3-206ENST00000462306 MEIG1Q5JSS6 88 aa9.63□□□□□ -0.87
ERCC3-206ENST00000462306 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
ERCC3-206ENST00000462306 RPL24P83731 157 aaKnown RBP9.61□□□□□ -0.87
ERCC3-206ENST00000462306 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
ERCC3-206ENST00000462306 LINC00587B1AMM8 73 aa9.6□□□□□ -0.87
ERCC3-206ENST00000462306 E9PLD3 99 aa9.6□□□□□ -0.87
ERCC3-206ENST00000462306 H0Y9J4 135 aa9.6□□□□□ -0.87
ERCC3-206ENST00000462306 NMUP48645 174 aa9.6□□□□□ -0.87
ERCC3-206ENST00000462306 TNXBP22105 4242 aa9.6□□□□□ -0.87
ERCC3-206ENST00000462306 ZNF861PO60384 105 aa9.59□□□□□ -0.87
ERCC3-206ENST00000462306 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
ERCC3-206ENST00000462306 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
ERCC3-206ENST00000462306 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
ERCC3-206ENST00000462306 BCE1O60756 84 aa9.58□□□□□ -0.88
ERCC3-206ENST00000462306 KRTDAPP60985 99 aa9.58□□□□□ -0.88
ERCC3-206ENST00000462306 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
ERCC3-206ENST00000462306 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
ERCC3-206ENST00000462306 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
ERCC3-206ENST00000462306 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
ERCC3-206ENST00000462306 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
ERCC3-206ENST00000462306 DAND5Q8N907 189 aa9.55□□□□□ -0.88
ERCC3-206ENST00000462306 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
ERCC3-206ENST00000462306 M0R378 163 aa9.54□□□□□ -0.88
ERCC3-206ENST00000462306 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
ERCC3-206ENST00000462306 KRTAP13-1Q8IUC0 172 aa9.54□□□□□ -0.88
ERCC3-206ENST00000462306 HIST3H2BBQ8N257 126 aa9.54□□□□□ -0.88
ERCC3-206ENST00000462306 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
ERCC3-206ENST00000462306 TMEM238C9JI98 176 aa9.53□□□□□ -0.88
ERCC3-206ENST00000462306 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
ERCC3-206ENST00000462306 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
ERCC3-206ENST00000462306 C20orf202A1L168 122 aa9.51□□□□□ -0.89
ERCC3-206ENST00000462306 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
ERCC3-206ENST00000462306 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
ERCC3-206ENST00000462306 NCR3O14931 201 aa9.5□□□□□ -0.89
ERCC3-206ENST00000462306 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
ERCC3-206ENST00000462306 TTTY13Q9BZ97 58 aa9.5□□□□□ -0.89
ERCC3-206ENST00000462306 UBE2AP49459 152 aa9.49□□□□□ -0.89
ERCC3-206ENST00000462306 LITAFQ99732 161 aa9.49□□□□□ -0.89
ERCC3-206ENST00000462306 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
ERCC3-206ENST00000462306 S100A2P29034 98 aa9.48□□□□□ -0.89
ERCC3-206ENST00000462306 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
ERCC3-206ENST00000462306 ATOH7Q8N100 152 aa9.48□□□□□ -0.89
ERCC3-206ENST00000462306 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 ZNF815PA8K554 130 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 S100A6P06703 90 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 PRLHP81277 87 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 FAM19A1Q7Z5A9 133 aa9.47□□□□□ -0.89
ERCC3-206ENST00000462306 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 TIMM17BO60830 172 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 AKR1D1P51857 326 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 MIEN1Q9BRT3 115 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
ERCC3-206ENST00000462306 PRYO14603 147 aa9.45□□□□□ -0.9
ERCC3-206ENST00000462306 NDUFC2O95298 119 aa9.45□□□□□ -0.9
ERCC3-206ENST00000462306 NPC2P61916 151 aa9.45□□□□□ -0.9
ERCC3-206ENST00000462306 SNRPEP62304 92 aaKnown RBP9.45□□□□□ -0.9
ERCC3-206ENST00000462306 SPRR1AP35321 89 aa9.44□□□□□ -0.9
ERCC3-206ENST00000462306 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
ERCC3-206ENST00000462306 C5orf52A6NGY3 159 aa9.42□□□□□ -0.9
ERCC3-206ENST00000462306 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
ERCC3-206ENST00000462306 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
ERCC3-206ENST00000462306 DDTP30046 118 aa9.41□□□□□ -0.9
ERCC3-206ENST00000462306 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
ERCC3-206ENST00000462306 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
ERCC3-206ENST00000462306 A0A087X002 238 aa9.4□□□□□ -0.9
ERCC3-206ENST00000462306 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
ERCC3-206ENST00000462306 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
ERCC3-206ENST00000462306 ANAPC11Q9NYG5 84 aa9.4□□□□□ -0.9
ERCC3-206ENST00000462306 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
ERCC3-206ENST00000462306 HIGD2AQ9BW72 106 aa9.38□□□□□ -0.91
ERCC3-206ENST00000462306 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
ERCC3-206ENST00000462306 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
ERCC3-206ENST00000462306 CRYGAP11844 174 aa9.37□□□□□ -0.91
ERCC3-206ENST00000462306 S100A12P80511 92 aa9.37□□□□□ -0.91
ERCC3-206ENST00000462306 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
ERCC3-206ENST00000462306 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
ERCC3-206ENST00000462306 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
ERCC3-206ENST00000462306 B5MCH6 92 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms