RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 COA6Q5JTJ3 125 aaKnown RBP6.5□□□□□ -1.37
TRAPPC12-213ENST00000461577 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 PET117Q6UWS5 81 aa6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
TRAPPC12-213ENST00000461577 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 J3QQQ9 107 aa6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 DIRC1Q969H9 104 aa6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC12-213ENST00000461577 C3orf79P0CE67 100 aa6.47□□□□□ -1.37
TRAPPC12-213ENST00000461577 NMUP48645 174 aa6.47□□□□□ -1.37
TRAPPC12-213ENST00000461577 KRTDAPP60985 99 aa6.47□□□□□ -1.37
TRAPPC12-213ENST00000461577 LINC01545Q5VT33 79 aa6.47□□□□□ -1.37
TRAPPC12-213ENST00000461577 VPREB1P12018 145 aa6.46□□□□□ -1.38
TRAPPC12-213ENST00000461577 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
TRAPPC12-213ENST00000461577 C20orf202A1L168 122 aa6.45□□□□□ -1.38
TRAPPC12-213ENST00000461577 E9PLD3 99 aa6.45□□□□□ -1.38
TRAPPC12-213ENST00000461577 BCE1O60756 84 aa6.45□□□□□ -1.38
TRAPPC12-213ENST00000461577 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
TRAPPC12-213ENST00000461577 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
TRAPPC12-213ENST00000461577 H0Y9J4 135 aa6.44□□□□□ -1.38
TRAPPC12-213ENST00000461577 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
TRAPPC12-213ENST00000461577 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
TRAPPC12-213ENST00000461577 ZNF861PO60384 105 aa6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 S100A6P06703 90 aa6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 S100A2P29034 98 aa6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 BOD1L2Q8IYS8 172 aa6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 Q8NDZ9 215 aa6.43□□□□□ -1.38
TRAPPC12-213ENST00000461577 IGLV1-50A0A075B6I6 118 aa6.42□□□□□ -1.38
TRAPPC12-213ENST00000461577 M0R378 163 aa6.42□□□□□ -1.38
TRAPPC12-213ENST00000461577 UBE2AP49459 152 aa6.42□□□□□ -1.38
TRAPPC12-213ENST00000461577 TNXBP22105 4242 aa6.42□□□□□ -1.38
TRAPPC12-213ENST00000461577 NCR3O14931 201 aa6.41□□□□□ -1.38
TRAPPC12-213ENST00000461577 AKR1D1P51857 326 aa6.41□□□□□ -1.38
TRAPPC12-213ENST00000461577 DAND5Q8N907 189 aa6.41□□□□□ -1.38
TRAPPC12-213ENST00000461577 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
TRAPPC12-213ENST00000461577 HERC1Q15751 4861 aa6.41□□□□□ -1.38
TRAPPC12-213ENST00000461577 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
TRAPPC12-213ENST00000461577 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
TRAPPC12-213ENST00000461577 IGKV2D-26A0A0A0MRZ7 120 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
TRAPPC12-213ENST00000461577 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
TRAPPC12-213ENST00000461577 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
TRAPPC12-213ENST00000461577 ATOH7Q8N100 152 aa6.38□□□□□ -1.39
TRAPPC12-213ENST00000461577 HIST1H2BLQ99880 126 aa6.38□□□□□ -1.39
TRAPPC12-213ENST00000461577 PRYO14603 147 aa6.37□□□□□ -1.39
TRAPPC12-213ENST00000461577 NPC2P61916 151 aa6.37□□□□□ -1.39
TRAPPC12-213ENST00000461577 S100A12P80511 92 aa6.37□□□□□ -1.39
TRAPPC12-213ENST00000461577 TIMM17BO60830 172 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 SNRPEP62304 92 aaKnown RBP6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 PRLHP81277 87 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 TTTY13Q9BZ97 58 aa6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC12-213ENST00000461577 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
TRAPPC12-213ENST00000461577 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
TRAPPC12-213ENST00000461577 NDUFC2O95298 119 aa6.35□□□□□ -1.39
TRAPPC12-213ENST00000461577 DDTP30046 118 aa6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 S100A7L2Q5SY68 101 aa6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 SCGB1D4Q6XE38 83 aa6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
TRAPPC12-213ENST00000461577 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
TRAPPC12-213ENST00000461577 HSBP1L1C9JCN9 74 aa6.33□□□□□ -1.4
TRAPPC12-213ENST00000461577 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
TRAPPC12-213ENST00000461577 LITAFQ99732 161 aa6.33□□□□□ -1.4
TRAPPC12-213ENST00000461577 LINC00337Q8N6G1 96 aa6.32□□□□□ -1.4
TRAPPC12-213ENST00000461577 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
TRAPPC12-213ENST00000461577 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 EIF4EBP3O60516 100 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 SCGB1D1O95968 90 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 CRYGAP11844 174 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 SPRR1AP35321 89 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 PCP2Q8IVA1 136 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
TRAPPC12-213ENST00000461577 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms