RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MUC7Q8TAX7 377 aa4.52□□□□□ -1.69
MSH2-204ENST00000461394 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
MSH2-204ENST00000461394 DNAH3Q8TD57 4116 aa4.52□□□□□ -1.69
MSH2-204ENST00000461394 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 GVQW2A0A096LPI5 108 aaPredicted RBP4.51□□□□□ -1.69
MSH2-204ENST00000461394 F8WDY8 70 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 LECT2O14960 151 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
MSH2-204ENST00000461394 WFDC2Q14508 124 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 CARD19Q96LW7 228 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
MSH2-204ENST00000461394 NDUFC2O95298 119 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
MSH2-204ENST00000461394 KRTAP21-3Q3LHN1 58 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 LINC01620Q4KN68 170 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 CASC10Q5T4H9 136 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 TENM3Q9P273 2699 aa4.5□□□□□ -1.69
MSH2-204ENST00000461394 K7ERU9 68 aa4.49□□□□□ -1.69
MSH2-204ENST00000461394 SLC25A20O43772 301 aa4.49□□□□□ -1.69
MSH2-204ENST00000461394 RPL28P46779 137 aaKnown RBP4.49□□□□□ -1.69
MSH2-204ENST00000461394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
MSH2-204ENST00000461394 ANK2Q01484 3957 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 LST1O00453 97 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 DNAL4O96015 105 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 OCIAD2Q56VL3 154 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 TMEM126AQ9H061 195 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 NOTCH1P46531 2555 aa4.48□□□□□ -1.69
MSH2-204ENST00000461394 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 NBDYA0A0U1RRE5 68 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 H0YGX0 51 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 J3QR89 54 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 M0R2N4 97 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 SNCGO76070 127 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 ANKRD29Q8N6D5 301 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
MSH2-204ENST00000461394 C14orf177Q52M58 125 aa4.46□□□□□ -1.7
MSH2-204ENST00000461394 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
MSH2-204ENST00000461394 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.45□□□□□ -1.7
MSH2-204ENST00000461394 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 H3BT86 120 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 M0R378 163 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 TRACP01848 142 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 Q6ZRP5 223 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 TEN1Q86WV5 123 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 Q8NDZ9 215 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 VPS25Q9BRG1 176 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 CBY1Q9Y3M2 126 aa4.45□□□□□ -1.7
MSH2-204ENST00000461394 TRAV23DV6A0A075B6W5 121 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 A0A087WYN8 130 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 TRBV10-3A0A0K0K1G6 114 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 DIRC1Q969H9 104 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
MSH2-204ENST00000461394 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
MSH2-204ENST00000461394 M0QXV9 152 aa4.43□□□□□ -1.7
MSH2-204ENST00000461394 LY6G6CO95867 125 aa4.43□□□□□ -1.7
MSH2-204ENST00000461394 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
MSH2-204ENST00000461394 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
MSH2-204ENST00000461394 MGAM2Q2M2H8 2515 aa4.43□□□□□ -1.7
MSH2-204ENST00000461394 IGKV2-24A0A0C4DH68 120 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 SLPIP03973 132 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 TLX1NBP0CAT3 122 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 COX7BP24311 80 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 WWC2-AS2Q96NR7 200 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
MSH2-204ENST00000461394 ZNF73O43830 326 aaPredicted RBP4.41□□□□□ -1.7
MSH2-204ENST00000461394 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
MSH2-204ENST00000461394 PKIGQ9Y2B9 76 aa4.41□□□□□ -1.7
MSH2-204ENST00000461394 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
MSH2-204ENST00000461394 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 A0A1B0GV72 72 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 A0A1B0GX51 115 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 hADV29S1A0JD25 119 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 FAM168BA1KXE4 195 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 Q8N814 137 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 DPH3Q96FX2 82 aa4.4□□□□□ -1.71
MSH2-204ENST00000461394 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
MSH2-204ENST00000461394 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
MSH2-204ENST00000461394 LINC00575Q6W349 94 aa4.39□□□□□ -1.71
MSH2-204ENST00000461394 A0A096LNI7 61 aa4.38□□□□□ -1.71
MSH2-204ENST00000461394 ETDCA0A1B0GVM5 59 aa4.38□□□□□ -1.71
MSH2-204ENST00000461394 C1orf134Q5TEV5 83 aa4.38□□□□□ -1.71
MSH2-204ENST00000461394 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
MSH2-204ENST00000461394 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 TRBV7-6A0A0J9YX20 115 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms