RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 BAALC-AS2P0C853 105 aa13.46□□□□□ -0.25
CCM2-203ENST00000461377 TMEM126AQ9H061 195 aa13.46□□□□□ -0.25
CCM2-203ENST00000461377 LINC00588Q9Y4M8 146 aa13.46□□□□□ -0.25
CCM2-203ENST00000461377 MDFIQ99750 246 aa13.45□□□□□ -0.26
CCM2-203ENST00000461377 NCR3O14931 201 aa13.45□□□□□ -0.26
CCM2-203ENST00000461377 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
CCM2-203ENST00000461377 IGKV2D-24A0A075B6R9 120 aa13.44□□□□□ -0.26
CCM2-203ENST00000461377 C2orf48Q96LS8 159 aa13.44□□□□□ -0.26
CCM2-203ENST00000461377 Q9HAA7 133 aa13.44□□□□□ -0.26
CCM2-203ENST00000461377 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
CCM2-203ENST00000461377 DNAL4O96015 105 aa13.41□□□□□ -0.26
CCM2-203ENST00000461377 Q6ZRU5 148 aa13.41□□□□□ -0.26
CCM2-203ENST00000461377 LECT2O14960 151 aa13.4□□□□□ -0.26
CCM2-203ENST00000461377 F8WDY8 70 aa13.4□□□□□ -0.27
CCM2-203ENST00000461377 S100A7L2Q5SY68 101 aa13.39□□□□□ -0.27
CCM2-203ENST00000461377 XGP55808 180 aa13.37□□□□□ -0.27
CCM2-203ENST00000461377 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
CCM2-203ENST00000461377 MGAM2Q2M2H8 2515 aa13.37□□□□□ -0.27
CCM2-203ENST00000461377 A0A1B0GX51 115 aa13.36□□□□□ -0.27
CCM2-203ENST00000461377 IGLV6-57P01721 117 aa13.36□□□□□ -0.27
CCM2-203ENST00000461377 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
CCM2-203ENST00000461377 RPL18AQ02543 176 aaKnown RBP13.36□□□□□ -0.27
CCM2-203ENST00000461377 LINC00167Q96N53 147 aa13.35□□□□□ -0.27
CCM2-203ENST00000461377 FAM240AA0A1B0GVK7 77 aa13.34□□□□□ -0.27
CCM2-203ENST00000461377 NDUFC2-KCTD14E9PQ53 114 aa13.34□□□□□ -0.27
CCM2-203ENST00000461377 MT-ATP8P03928 68 aa13.34□□□□□ -0.27
CCM2-203ENST00000461377 SCGB1A1P11684 91 aa13.34□□□□□ -0.27
CCM2-203ENST00000461377 C6orf99Q4VX62 202 aa13.34□□□□□ -0.27
CCM2-203ENST00000461377 SYCNQ0VAF6 134 aa13.32□□□□□ -0.28
CCM2-203ENST00000461377 Q8N814 137 aa13.32□□□□□ -0.28
CCM2-203ENST00000461377 SLPIP03973 132 aa13.31□□□□□ -0.28
CCM2-203ENST00000461377 VPREB1P12018 145 aa13.31□□□□□ -0.28
CCM2-203ENST00000461377 B9D2Q9BPU9 175 aa13.3□□□□□ -0.28
CCM2-203ENST00000461377 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
CCM2-203ENST00000461377 RMI2Q96E14 147 aa13.29□□□□□ -0.28
CCM2-203ENST00000461377 TRBV10-3A0A0K0K1G6 114 aa13.29□□□□□ -0.28
CCM2-203ENST00000461377 INAFM2P0DMQ5 153 aa13.29□□□□□ -0.28
CCM2-203ENST00000461377 DNAH9Q9NYC9 4486 aa13.28□□□□□ -0.28
CCM2-203ENST00000461377 CASC10Q5T4H9 136 aa13.27□□□□□ -0.28
CCM2-203ENST00000461377 LINC00575Q6W349 94 aa13.27□□□□□ -0.28
CCM2-203ENST00000461377 Q6ZRP5 223 aa13.27□□□□□ -0.28
CCM2-203ENST00000461377 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
CCM2-203ENST00000461377 DNAH1Q9P2D7 4330 aa13.27□□□□□ -0.29
CCM2-203ENST00000461377 GAGE2EQ4V326 116 aa13.27□□□□□ -0.29
CCM2-203ENST00000461377 GAGE2DQ9UEU5 116 aa13.27□□□□□ -0.29
CCM2-203ENST00000461377 C9orf129Q5T035 196 aaKnown RBP13.26□□□□□ -0.29
CCM2-203ENST00000461377 TRAV23DV6A0A075B6W5 121 aa13.25□□□□□ -0.29
CCM2-203ENST00000461377 USP17L23D6RBM5 183 aa13.25□□□□□ -0.29
CCM2-203ENST00000461377 ACYP1P07311 99 aa13.25□□□□□ -0.29
CCM2-203ENST00000461377 M0R378 163 aa13.24□□□□□ -0.29
CCM2-203ENST00000461377 SNCGO76070 127 aa13.23□□□□□ -0.29
CCM2-203ENST00000461377 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
CCM2-203ENST00000461377 DIRC1Q969H9 104 aa13.22□□□□□ -0.29
CCM2-203ENST00000461377 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
CCM2-203ENST00000461377 hADV29S1A0JD25 119 aa13.2□□□□□ -0.3
CCM2-203ENST00000461377 ZNF73O43830 326 aaPredicted RBP13.2□□□□□ -0.3
CCM2-203ENST00000461377 TMEM256-PLSCR3K7ERE1 68 aa13.2□□□□□ -0.3
CCM2-203ENST00000461377 C14orf132Q9NPU4 83 aa13.19□□□□□ -0.3
CCM2-203ENST00000461377 TRBV7-6A0A0J9YX20 115 aa13.18□□□□□ -0.3
CCM2-203ENST00000461377 TTC32Q5I0X7 151 aa13.17□□□□□ -0.3
CCM2-203ENST00000461377 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
CCM2-203ENST00000461377 GAGE2AQ6NT46 116 aa13.16□□□□□ -0.3
CCM2-203ENST00000461377 KRTAP1-5Q9BYS1 174 aa13.16□□□□□ -0.3
CCM2-203ENST00000461377 DYNC2H1Q8NCM8 4307 aaKnown RBP13.16□□□□□ -0.3
CCM2-203ENST00000461377 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
CCM2-203ENST00000461377 COX7BP24311 80 aa13.15□□□□□ -0.3
CCM2-203ENST00000461377 ELOF1P60002 83 aaKnown RBP13.15□□□□□ -0.3
CCM2-203ENST00000461377 SDIM1Q6ZPB5 146 aa13.14□□□□□ -0.31
CCM2-203ENST00000461377 PLA2G2DQ9UNK4 145 aa13.14□□□□□ -0.31
CCM2-203ENST00000461377 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
CCM2-203ENST00000461377 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
CCM2-203ENST00000461377 JMJD7-PLA2G4BH0Y9G9 81 aa13.13□□□□□ -0.31
CCM2-203ENST00000461377 NHLRC4P0CG21 123 aaPredicted RBP13.13□□□□□ -0.31
CCM2-203ENST00000461377 SMCR5Q8TEV8 140 aa13.13□□□□□ -0.31
CCM2-203ENST00000461377 Q6Q795 121 aa13.11□□□□□ -0.31
CCM2-203ENST00000461377 NKAPP1Q8N9T2 125 aa13.11□□□□□ -0.31
CCM2-203ENST00000461377 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
CCM2-203ENST00000461377 Q6ZQY7 126 aa13.11□□□□□ -0.31
CCM2-203ENST00000461377 A0A1B0GV72 72 aa13.09□□□□□ -0.31
CCM2-203ENST00000461377 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
CCM2-203ENST00000461377 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
CCM2-203ENST00000461377 H3BQ85 93 aa13.09□□□□□ -0.31
CCM2-203ENST00000461377 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.08□□□□□ -0.32
CCM2-203ENST00000461377 LINC00643Q86TS7 51 aa13.08□□□□□ -0.32
CCM2-203ENST00000461377 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
CCM2-203ENST00000461377 KCNQ1DNQ9H478 68 aa13.07□□□□□ -0.32
CCM2-203ENST00000461377 NUPR2A6NF83 97 aa13.07□□□□□ -0.32
CCM2-203ENST00000461377 CCKP06307 115 aa13.07□□□□□ -0.32
CCM2-203ENST00000461377 LOC107984640A0A0U1RRK4 108 aa13.06□□□□□ -0.32
CCM2-203ENST00000461377 TRBV7-7A0A0K0K1E9 115 aa13.05□□□□□ -0.32
CCM2-203ENST00000461377 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
CCM2-203ENST00000461377 KRTAP7-1Q8IUC3 87 aa13.03□□□□□ -0.32
CCM2-203ENST00000461377 PSCAO43653 123 aa13.02□□□□□ -0.32
CCM2-203ENST00000461377 LINC00846Q9NV44 126 aa13.01□□□□□ -0.33
CCM2-203ENST00000461377 LAMTOR3Q9UHA4 124 aa13.01□□□□□ -0.33
CCM2-203ENST00000461377 CNBPP62633 177 aaKnown RBP13.01□□□□□ -0.33
CCM2-203ENST00000461377 GHRHP01286 108 aa13□□□□□ -0.33
CCM2-203ENST00000461377 RBM3P98179 157 aaKnown RBP13□□□□□ -0.33
CCM2-203ENST00000461377 IGLV1-50A0A075B6I6 118 aa13□□□□□ -0.33
CCM2-203ENST00000461377 PRYO14603 147 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms