RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
RAB11FIP3-207ENST00000461009 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 J3QQQ9 107 aa8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 NMUP48645 174 aa8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
RAB11FIP3-207ENST00000461009 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
RAB11FIP3-207ENST00000461009 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
RAB11FIP3-207ENST00000461009 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
RAB11FIP3-207ENST00000461009 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
RAB11FIP3-207ENST00000461009 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 E9PLD3 99 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
RAB11FIP3-207ENST00000461009 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
RAB11FIP3-207ENST00000461009 A0A0U1RRA0 63 aa8.16□□□□□ -1.1
RAB11FIP3-207ENST00000461009 SMIM13P0DJ93 91 aa8.16□□□□□ -1.1
RAB11FIP3-207ENST00000461009 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
RAB11FIP3-207ENST00000461009 HIST3H2BBQ8N257 126 aa8.15□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
RAB11FIP3-207ENST00000461009 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.113e-6■■■■□ 23.3
RAB11FIP3-207ENST00000461009 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
RAB11FIP3-207ENST00000461009 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
RAB11FIP3-207ENST00000461009 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
RAB11FIP3-207ENST00000461009 VPREB1P12018 145 aa8.12□□□□□ -1.11
RAB11FIP3-207ENST00000461009 GAGE10A6NGK3 116 aa8.11□□□□□ -1.11
RAB11FIP3-207ENST00000461009 SNRPEP62304 92 aaKnown RBP8.11□□□□□ -1.11
RAB11FIP3-207ENST00000461009 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
RAB11FIP3-207ENST00000461009 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
RAB11FIP3-207ENST00000461009 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
RAB11FIP3-207ENST00000461009 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
RAB11FIP3-207ENST00000461009 M0R378 163 aa8.09□□□□□ -1.11
RAB11FIP3-207ENST00000461009 DIRC1Q969H9 104 aa8.09□□□□□ -1.11
RAB11FIP3-207ENST00000461009 MIEN1Q9BRT3 115 aa8.09□□□□□ -1.11
RAB11FIP3-207ENST00000461009 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ZNF815PA8K554 130 aa8.08□□□□□ -1.12
RAB11FIP3-207ENST00000461009 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
RAB11FIP3-207ENST00000461009 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
RAB11FIP3-207ENST00000461009 TIMM17BO60830 172 aa8.07□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
RAB11FIP3-207ENST00000461009 IGKV2-28A0A075B6P5 120 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 IGKV2D-26A0A0A0MRZ7 120 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 HSBP1L1C9JCN9 74 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ZNF861PO60384 105 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 BCE1O60756 84 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 IGKV2D-28P01615 120 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 DAND5Q8N907 189 aa8.06□□□□□ -1.12
RAB11FIP3-207ENST00000461009 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
RAB11FIP3-207ENST00000461009 Q8NDZ9 215 aa8.05□□□□□ -1.12
RAB11FIP3-207ENST00000461009 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
RAB11FIP3-207ENST00000461009 UBE2AP49459 152 aa8.04□□□□□ -1.12
RAB11FIP3-207ENST00000461009 S100A12P80511 92 aa8.04□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ANKRD39Q53RE8 183 aa8.04□□□□□ -1.12
RAB11FIP3-207ENST00000461009 HMCN2Q8NDA2 5059 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 H0Y9J4 135 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 NCR3O14931 201 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 NDUFC2O95298 119 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
RAB11FIP3-207ENST00000461009 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
RAB11FIP3-207ENST00000461009 COPS9Q8WXC6 57 aa8.02□□□□□ -1.13
RAB11FIP3-207ENST00000461009 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
RAB11FIP3-207ENST00000461009 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
RAB11FIP3-207ENST00000461009 TMEM126AQ9H061 195 aa8.01□□□□□ -1.13
RAB11FIP3-207ENST00000461009 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
RAB11FIP3-207ENST00000461009 PRYO14603 147 aa8□□□□□ -1.13
RAB11FIP3-207ENST00000461009 NPC2P61916 151 aa8□□□□□ -1.13
RAB11FIP3-207ENST00000461009 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
RAB11FIP3-207ENST00000461009 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
RAB11FIP3-207ENST00000461009 LITAFQ99732 161 aa8□□□□□ -1.13
RAB11FIP3-207ENST00000461009 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
RAB11FIP3-207ENST00000461009 Q6ZVH6 145 aa7.99□□□□□ -1.13
RAB11FIP3-207ENST00000461009 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
RAB11FIP3-207ENST00000461009 CBY1Q9Y3M2 126 aa7.99□□□□□ -1.13
RAB11FIP3-207ENST00000461009 DDTP30046 118 aa7.98□□□□□ -1.13
RAB11FIP3-207ENST00000461009 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
RAB11FIP3-207ENST00000461009 PCP2Q8IVA1 136 aa7.98□□□□□ -1.13
RAB11FIP3-207ENST00000461009 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
RAB11FIP3-207ENST00000461009 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
RAB11FIP3-207ENST00000461009 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
RAB11FIP3-207ENST00000461009 IFITM1P13164 125 aa7.97□□□□□ -1.13
RAB11FIP3-207ENST00000461009 LINC00518Q8N0U6 118 aa7.97□□□□□ -1.13
RAB11FIP3-207ENST00000461009 TNXBP22105 4242 aa7.96□□□□□ -1.13
RAB11FIP3-207ENST00000461009 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
RAB11FIP3-207ENST00000461009 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
RAB11FIP3-207ENST00000461009 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
RAB11FIP3-207ENST00000461009 PRLHP81277 87 aa7.94□□□□□ -1.14
RAB11FIP3-207ENST00000461009 SPRR1AP35321 89 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms