RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
VBP1-202ENST00000460509 FMN2Q9NZ56 1722 aa0.47□□□□□ -2.33
VBP1-202ENST00000460509 PREX1Q8TCU6 1659 aa0.47□□□□□ -2.33
VBP1-202ENST00000460509 USMG5Q96IX5 58 aa0.47□□□□□ -2.33
VBP1-202ENST00000460509 IQGAP3Q86VI3 1631 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 KIF20BQ96Q89 1820 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 RGPD8O14715 1765 aaPredicted RBP0.46□□□□□ -2.34
VBP1-202ENST00000460509 RGPD5Q99666 1765 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 SCN11AQ9UI33 1791 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 CD163L1Q9NR16 1453 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 ANKRD36A6QL64 1941 aa0.46□□□□□ -2.34
VBP1-202ENST00000460509 TTC28Q96AY4 2481 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 TIAM2Q8IVF5 1701 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 DOT1LQ8TEK3 1739 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 TRAV21A0A0B4J279 112 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 COX7BP24311 80 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 SPRR1AP35321 89 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 Q5BKY6 102 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 ATP5EP2Q5VTU8 51 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 C18orf32Q8TCD1 76 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 CRIPTQ9P021 101 aa0.45□□□□□ -2.34
VBP1-202ENST00000460509 MYO5CQ9NQX4 1742 aa0.44□□□□□ -2.34
VBP1-202ENST00000460509 CFAP43Q8NDM7 1665 aa0.44□□□□□ -2.34
VBP1-202ENST00000460509 SPRR1BP22528 89 aa0.44□□□□□ -2.34
VBP1-202ENST00000460509 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
VBP1-202ENST00000460509 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
VBP1-202ENST00000460509 TSC2P49815 1807 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 EIF2AK4Q9P2K8 1649 aaKnown RBP0.43□□□□□ -2.34
VBP1-202ENST00000460509 COL14A1Q05707 1796 aaKnown RBP0.43□□□□□ -2.34
VBP1-202ENST00000460509 ARFGEF2Q9Y6D5 1785 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 SPTY2D1-AS1A0A0U1RR47 76 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 COX8AP10176 69 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 GAFA1Q96PS6 74 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 DNAJC13O75165 2243 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 DNMBPQ6XZF7 1577 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 UGGT2Q9NYU1 1516 aa0.43□□□□□ -2.34
VBP1-202ENST00000460509 NWD1Q149M9 1564 aa0.42□□□□□ -2.34
VBP1-202ENST00000460509 I3L3M4 83 aa0.42□□□□□ -2.34
VBP1-202ENST00000460509 NDUFB1O75438 58 aa0.42□□□□□ -2.34
VBP1-202ENST00000460509 MRPL34Q9BQ48 92 aaKnown RBP0.42□□□□□ -2.34
VBP1-202ENST00000460509 CACNA1HO95180 2353 aa0.42□□□□□ -2.34
VBP1-202ENST00000460509 CACNA1EQ15878 2313 aa0.41□□□□□ -2.34
VBP1-202ENST00000460509 LCE6AA0A183 80 aa0.41□□□□□ -2.34
VBP1-202ENST00000460509 CPSF4LA6NMK7 179 aaKnown RBP0.41□□□□□ -2.34
VBP1-202ENST00000460509 WFDC9Q8NEX5 89 aa0.41□□□□□ -2.34
VBP1-202ENST00000460509 BCORQ6W2J9 1755 aa0.41□□□□□ -2.34
VBP1-202ENST00000460509 NESP48681 1621 aa0.4□□□□□ -2.35
VBP1-202ENST00000460509 CICQ96RK0 1608 aaPredicted RBP0.4□□□□□ -2.35
VBP1-202ENST00000460509 CFDP00746 253 aaPredicted RBP0.4□□□□□ -2.35
VBP1-202ENST00000460509 IFI6P09912 130 aa0.4□□□□□ -2.35
VBP1-202ENST00000460509 DEFB109BQ30KR1 87 aa0.4□□□□□ -2.35
VBP1-202ENST00000460509 DEFB105AQ8NG35 78 aa0.4□□□□□ -2.35
VBP1-202ENST00000460509 PARP4Q9UKK3 1724 aaKnown RBP0.4□□□□□ -2.35
VBP1-202ENST00000460509 TNRC6CQ9HCJ0 1690 aaKnown RBP0.4□□□□□ -2.35
VBP1-202ENST00000460509 CLIP1P30622 1438 aa0.39□□□□□ -2.35
VBP1-202ENST00000460509 SMIM13P0DJ93 91 aa0.39□□□□□ -2.35
VBP1-202ENST00000460509 HMGA1P17096 107 aaKnown RBP0.39□□□□□ -2.35
VBP1-202ENST00000460509 IFI27P40305 119 aaPredicted RBP0.39□□□□□ -2.35
VBP1-202ENST00000460509 ADAMTS12P58397 1594 aa0.39□□□□□ -2.35
VBP1-202ENST00000460509 SPINK1P00995 79 aa0.38□□□□□ -2.35
VBP1-202ENST00000460509 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
VBP1-202ENST00000460509 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
VBP1-202ENST00000460509 PLCH1Q4KWH8 1693 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 TNCP24821 2201 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 UMAD1C9J7I0 102 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 CCL22O00626 93 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 RPL38P63173 70 aaKnown RBP0.37□□□□□ -2.35
VBP1-202ENST00000460509 NREPQ16612 68 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 SMCO4Q9NRQ5 59 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 ITSN1Q15811 1721 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 RICTORQ6R327 1708 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 ANKRD50Q9ULJ7 1429 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 POLQO75417 2590 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 WIZO95785 1651 aa0.37□□□□□ -2.35
VBP1-202ENST00000460509 ZC3H13Q5T200 1668 aaKnown RBP0.37□□□□□ -2.35
VBP1-202ENST00000460509 CDC42BPGQ6DT37 1551 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 A0A087WXM4 84 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 KLK9Q2XQG4 91 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 H1FX-AS1Q4G0G2 97 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 LELP1Q5T871 98 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 LMTK2Q8IWU2 1503 aa0.36□□□□□ -2.35
VBP1-202ENST00000460509 DUOX2Q9NRD8 1548 aa0.35□□□□□ -2.35
VBP1-202ENST00000460509 APLNQ9ULZ1 77 aa0.35□□□□□ -2.35
VBP1-202ENST00000460509 U3KQA8 63 aa0.35□□□□□ -2.35
VBP1-202ENST00000460509 CELSR2Q9HCU4 2923 aa0.35□□□□□ -2.35
VBP1-202ENST00000460509 ABCA9Q8IUA7 1624 aa0.35□□□□□ -2.35
VBP1-202ENST00000460509 COX6B2Q6YFQ2 88 aa0.34□□□□□ -2.36
VBP1-202ENST00000460509 RNF17Q9BXT8 1623 aaKnown RBP0.34□□□□□ -2.36
VBP1-202ENST00000460509 ANKRD17O75179 2603 aaKnown RBP0.34□□□□□ -2.36
VBP1-202ENST00000460509 ASXL1Q8IXJ9 1541 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 MAST4O15021 2626 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 PDCD5O14737 125 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 FXYD6Q9H0Q3 95 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
VBP1-202ENST00000460509 C4AP0C0L4 1744 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 C4BP0C0L5 1744 aa0.33□□□□□ -2.36
VBP1-202ENST00000460509 ABCA12Q86UK0 2595 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 MROH1Q8NDA8 1641 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms