RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SCO1O75880 301 aa8.18□□□□□ -1.1
UPF3AP2-201ENST00000457924 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
UPF3AP2-201ENST00000457924 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
UPF3AP2-201ENST00000457924 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
UPF3AP2-201ENST00000457924 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
UPF3AP2-201ENST00000457924 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
UPF3AP2-201ENST00000457924 ATP5LO75964 103 aa8.16□□□□□ -1.1
UPF3AP2-201ENST00000457924 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
UPF3AP2-201ENST00000457924 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
UPF3AP2-201ENST00000457924 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
UPF3AP2-201ENST00000457924 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 TMEM238C9JI98 176 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 ERASQ7Z444 233 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 GNB1LQ9BYB4 327 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
UPF3AP2-201ENST00000457924 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
UPF3AP2-201ENST00000457924 PFN2P35080 140 aa8.14□□□□□ -1.11
UPF3AP2-201ENST00000457924 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
UPF3AP2-201ENST00000457924 M0R378 163 aa8.13□□□□□ -1.11
UPF3AP2-201ENST00000457924 VPREB1P12018 145 aa8.13□□□□□ -1.11
UPF3AP2-201ENST00000457924 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
UPF3AP2-201ENST00000457924 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
UPF3AP2-201ENST00000457924 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
UPF3AP2-201ENST00000457924 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
UPF3AP2-201ENST00000457924 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
UPF3AP2-201ENST00000457924 H3BRM9 83 aa8.1□□□□□ -1.11
UPF3AP2-201ENST00000457924 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
UPF3AP2-201ENST00000457924 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
UPF3AP2-201ENST00000457924 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
UPF3AP2-201ENST00000457924 LINC01549A6NIU2 74 aa8.09□□□□□ -1.11
UPF3AP2-201ENST00000457924 MT-ND4LP03901 98 aa8.09□□□□□ -1.11
UPF3AP2-201ENST00000457924 RAB14P61106 215 aa8.09□□□□□ -1.11
UPF3AP2-201ENST00000457924 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
UPF3AP2-201ENST00000457924 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
UPF3AP2-201ENST00000457924 Q8NBF4 154 aa8.08□□□□□ -1.12
UPF3AP2-201ENST00000457924 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
UPF3AP2-201ENST00000457924 COX17Q14061 63 aa8.07□□□□□ -1.12
UPF3AP2-201ENST00000457924 PMVKQ15126 192 aa8.07□□□□□ -1.12
UPF3AP2-201ENST00000457924 DAND5Q8N907 189 aa8.07□□□□□ -1.12
UPF3AP2-201ENST00000457924 SPINK1P00995 79 aa8.06□□□□□ -1.12
UPF3AP2-201ENST00000457924 KIAA1644Q3SXP7 199 aa8.06□□□□□ -1.12
UPF3AP2-201ENST00000457924 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
UPF3AP2-201ENST00000457924 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
UPF3AP2-201ENST00000457924 A0A1B0GVG6 124 aa8.04□□□□□ -1.12
UPF3AP2-201ENST00000457924 Q8NDZ9 215 aa8.04□□□□□ -1.12
UPF3AP2-201ENST00000457924 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
UPF3AP2-201ENST00000457924 LINC01546A6NGU7 62 aa8.02□□□□□ -1.13
UPF3AP2-201ENST00000457924 IGLC3P0DOY3 106 aa8.02□□□□□ -1.13
UPF3AP2-201ENST00000457924 FAM19A2Q8N3H0 131 aa8.01□□□□□ -1.13
UPF3AP2-201ENST00000457924 NDUFA6P56556 154 aa8□□□□□ -1.13
UPF3AP2-201ENST00000457924 SFTA2Q6UW10 78 aa8□□□□□ -1.13
UPF3AP2-201ENST00000457924 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
UPF3AP2-201ENST00000457924 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
UPF3AP2-201ENST00000457924 SMCO4Q9NRQ5 59 aa7.99□□□□□ -1.13
UPF3AP2-201ENST00000457924 PRYO14603 147 aa7.98□□□□□ -1.13
UPF3AP2-201ENST00000457924 LINC00158P58513 81 aa7.98□□□□□ -1.13
UPF3AP2-201ENST00000457924 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
UPF3AP2-201ENST00000457924 FA2HQ7L5A8 372 aa7.98□□□□□ -1.13
UPF3AP2-201ENST00000457924 SLC25A20O43772 301 aa7.96□□□□□ -1.14
UPF3AP2-201ENST00000457924 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
UPF3AP2-201ENST00000457924 Q8N377 158 aa7.96□□□□□ -1.14
UPF3AP2-201ENST00000457924 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
UPF3AP2-201ENST00000457924 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
UPF3AP2-201ENST00000457924 MOBPQ13875 183 aa7.95□□□□□ -1.14
UPF3AP2-201ENST00000457924 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
UPF3AP2-201ENST00000457924 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 A0A0U1RRA0 63 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 SPRR1AP35321 89 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
UPF3AP2-201ENST00000457924 ATP6V1G1O75348 118 aa7.93□□□□□ -1.14
UPF3AP2-201ENST00000457924 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
UPF3AP2-201ENST00000457924 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
UPF3AP2-201ENST00000457924 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
UPF3AP2-201ENST00000457924 NCR3O14931 201 aa7.92□□□□□ -1.14
UPF3AP2-201ENST00000457924 BOD1L2Q8IYS8 172 aa7.92□□□□□ -1.14
UPF3AP2-201ENST00000457924 MT1HP80294 61 aa7.91□□□□□ -1.14
UPF3AP2-201ENST00000457924 S100A12P80511 92 aa7.91□□□□□ -1.14
UPF3AP2-201ENST00000457924 BAGE3Q86Y29 109 aa7.9□□□□□ -1.14
UPF3AP2-201ENST00000457924 A0A096LNJ9 63 aa7.89□□□□□ -1.15
UPF3AP2-201ENST00000457924 S100PP25815 95 aa7.89□□□□□ -1.15
UPF3AP2-201ENST00000457924 FABP9Q0Z7S8 132 aa7.89□□□□□ -1.15
UPF3AP2-201ENST00000457924 COX19Q49B96 90 aa7.89□□□□□ -1.15
UPF3AP2-201ENST00000457924 TRBV10-3A0A0K0K1G6 114 aa7.88□□□□□ -1.15
UPF3AP2-201ENST00000457924 HBDP02042 147 aa7.88□□□□□ -1.15
UPF3AP2-201ENST00000457924 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
UPF3AP2-201ENST00000457924 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
UPF3AP2-201ENST00000457924 ERC2-IT1O76042 136 aa7.87□□□□□ -1.15
UPF3AP2-201ENST00000457924 MEIG1Q5JSS6 88 aa7.87□□□□□ -1.15
UPF3AP2-201ENST00000457924 LINC00614P0C842 121 aa7.86□□□□□ -1.15
UPF3AP2-201ENST00000457924 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
UPF3AP2-201ENST00000457924 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
UPF3AP2-201ENST00000457924 PMCHL1Q16048 86 aa7.85□□□□□ -1.15
UPF3AP2-201ENST00000457924 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
UPF3AP2-201ENST00000457924 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
UPF3AP2-201ENST00000457924 CHTOPQ9Y3Y2 248 aaKnown RBP7.85□□□□□ -1.15
UPF3AP2-201ENST00000457924 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
UPF3AP2-201ENST00000457924 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms