RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 LINC00167Q96N53 147 aa14.14□□□□□ -0.15
CBX3-204ENST00000456948 HIST1H2BNQ99877 126 aa14.14□□□□□ -0.15
CBX3-204ENST00000456948 HIST1H2BMQ99879 126 aa14.14□□□□□ -0.15
CBX3-204ENST00000456948 MYMXA0A1B0GTQ4 84 aa14.13□□□□□ -0.15
CBX3-204ENST00000456948 H0Y9J4 135 aa14.13□□□□□ -0.15
CBX3-204ENST00000456948 MEIG1Q5JSS6 88 aa14.13□□□□□ -0.15
CBX3-204ENST00000456948 PLEKHB2Q96CS7 222 aa14.13□□□□□ -0.15
CBX3-204ENST00000456948 IGKCP01834 107 aa14.12□□□□□ -0.15
CBX3-204ENST00000456948 GAGE10A6NGK3 116 aa14.11□□□□□ -0.15
CBX3-204ENST00000456948 RPL37AP8A6NKH3 93 aa14.11□□□□□ -0.15
CBX3-204ENST00000456948 NDUFA12Q9UI09 145 aa14.11□□□□□ -0.15
CBX3-204ENST00000456948 ZNF861PO60384 105 aa14.1□□□□□ -0.15
CBX3-204ENST00000456948 LEPROTO15243 131 aa14.09□□□□□ -0.15
CBX3-204ENST00000456948 BCE1O60756 84 aa14.09□□□□□ -0.15
CBX3-204ENST00000456948 RPL28P46779 137 aaKnown RBP14.09□□□□□ -0.15
CBX3-204ENST00000456948 A0A0U1RRA0 63 aa14.07□□□□□ -0.16
CBX3-204ENST00000456948 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
CBX3-204ENST00000456948 KRTAP10-8P60410 259 aa14.06□□□□□ -0.16
CBX3-204ENST00000456948 PMCHL2Q9BQD1 86 aa14.06□□□□□ -0.16
CBX3-204ENST00000456948 VPREB1P12018 145 aa14.05□□□□□ -0.16
CBX3-204ENST00000456948 LGALS3P17931 250 aaKnown RBP14.05□□□□□ -0.16
CBX3-204ENST00000456948 NMUP48645 174 aa14.05□□□□□ -0.16
CBX3-204ENST00000456948 J3QQQ9 107 aa14.04□□□□□ -0.16
CBX3-204ENST00000456948 SYS1-DBNDD2H3BUS1 97 aa14.03□□□□□ -0.16
CBX3-204ENST00000456948 S100A1P23297 94 aa14.03□□□□□ -0.16
CBX3-204ENST00000456948 IGKV2-28A0A075B6P5 120 aa14.02□□□□□ -0.17
CBX3-204ENST00000456948 IGKV2D-28P01615 120 aa14.02□□□□□ -0.17
CBX3-204ENST00000456948 UBE2AP49459 152 aa14.02□□□□□ -0.17
CBX3-204ENST00000456948 IGLV1-50A0A075B6I6 118 aa14.01□□□□□ -0.17
CBX3-204ENST00000456948 PET117Q6UWS5 81 aa14.01□□□□□ -0.17
CBX3-204ENST00000456948 MIR7-3HGQ8N6C7 128 aa14.01□□□□□ -0.17
CBX3-204ENST00000456948 COA6Q5JTJ3 125 aaKnown RBP13.99□□□□□ -0.17
CBX3-204ENST00000456948 BOD1L2Q8IYS8 172 aa13.99□□□□□ -0.17
CBX3-204ENST00000456948 TNXBP22105 4242 aa13.98□□□□□ -0.17
CBX3-204ENST00000456948 M0R378 163 aa13.98□□□□□ -0.17
CBX3-204ENST00000456948 RPL13AP40429 203 aaKnown RBP13.98□□□□□ -0.17
CBX3-204ENST00000456948 HMCN2Q8NDA2 5059 aa13.98□□□□□ -0.17
CBX3-204ENST00000456948 E9PLD3 99 aa13.96□□□□□ -0.17
CBX3-204ENST00000456948 TSPEAR-AS2P59090 65 aa13.96□□□□□ -0.17
CBX3-204ENST00000456948 S100A12P80511 92 aa13.96□□□□□ -0.17
CBX3-204ENST00000456948 MIEN1Q9BRT3 115 aa13.96□□□□□ -0.17
CBX3-204ENST00000456948 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
CBX3-204ENST00000456948 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
CBX3-204ENST00000456948 PRR26Q8N8Z3 221 aa13.95□□□□□ -0.18
CBX3-204ENST00000456948 TMEM126AQ9H061 195 aa13.94□□□□□ -0.18
CBX3-204ENST00000456948 C20orf202A1L168 122 aa13.93□□□□□ -0.18
CBX3-204ENST00000456948 FAM19A1Q7Z5A9 133 aa13.93□□□□□ -0.18
CBX3-204ENST00000456948 KRTAP1-4P0C5Y4 121 aa13.92□□□□□ -0.18
CBX3-204ENST00000456948 KRTDAPP60985 99 aa13.92□□□□□ -0.18
CBX3-204ENST00000456948 AKR1D1P51857 326 aa13.91□□□□□ -0.18
CBX3-204ENST00000456948 TMEM238C9JI98 176 aa13.9□□□□□ -0.18
CBX3-204ENST00000456948 C3orf79P0CE67 100 aa13.9□□□□□ -0.18
CBX3-204ENST00000456948 Q8NDZ9 215 aa13.9□□□□□ -0.18
CBX3-204ENST00000456948 LOC107984156A0A0G2JMH3 177 aa13.89□□□□□ -0.19
CBX3-204ENST00000456948 ARL17AQ8IVW1 177 aa13.89□□□□□ -0.19
CBX3-204ENST00000456948 NCR3O14931 201 aa13.88□□□□□ -0.19
CBX3-204ENST00000456948 KRTAP13-1Q8IUC0 172 aa13.88□□□□□ -0.19
CBX3-204ENST00000456948 DAND5Q8N907 189 aa13.87□□□□□ -0.19
CBX3-204ENST00000456948 A0A0J9YXY3 114 aa13.86□□□□□ -0.19
CBX3-204ENST00000456948 PRYO14603 147 aa13.86□□□□□ -0.19
CBX3-204ENST00000456948 CRYGAP11844 174 aa13.85□□□□□ -0.19
CBX3-204ENST00000456948 PRLHP81277 87 aa13.85□□□□□ -0.19
CBX3-204ENST00000456948 TRBV10-2A0A0K0K1G8 114 aa13.84□□□□□ -0.19
CBX3-204ENST00000456948 SPANXB1Q9NS25 103 aaPredicted RBP13.83□□□□□ -0.2
CBX3-204ENST00000456948 NDUFC2O95298 119 aa13.82□□□□□ -0.2
CBX3-204ENST00000456948 S100A2P29034 98 aa13.82□□□□□ -0.2
CBX3-204ENST00000456948 KCNQ1DNQ9H478 68 aa13.82□□□□□ -0.2
CBX3-204ENST00000456948 ETDCA0A1B0GVM5 59 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 ZNF815PA8K554 130 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 S100A6P06703 90 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 S100A7L2Q5SY68 101 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 LINC00337Q8N6G1 96 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 HIGD2AQ9BW72 106 aa13.8□□□□□ -0.2
CBX3-204ENST00000456948 TRBV10-3A0A0K0K1G6 114 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 TIMM17BO60830 172 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 DDTP30046 118 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 FAM229BQ4G0N7 80 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 UBR4Q5T4S7 5183 aa13.79□□□□□ -0.2
CBX3-204ENST00000456948 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.21
CBX3-204ENST00000456948 ADAMTSL4-AS1Q5T5F5 129 aa13.76□□□□□ -0.21
CBX3-204ENST00000456948 ZNF706Q9Y5V0 76 aaPredicted RBP13.76□□□□□ -0.21
CBX3-204ENST00000456948 SPRR1AP35321 89 aa13.75□□□□□ -0.21
CBX3-204ENST00000456948 NPC2P61916 151 aa13.75□□□□□ -0.21
CBX3-204ENST00000456948 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
CBX3-204ENST00000456948 SCGB1D4Q6XE38 83 aa13.74□□□□□ -0.21
CBX3-204ENST00000456948 COPS9Q8WXC6 57 aa13.73□□□□□ -0.21
CBX3-204ENST00000456948 A0A087X002 238 aa13.72□□□□□ -0.21
CBX3-204ENST00000456948 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.21
CBX3-204ENST00000456948 LINC00308Q8TCZ7 52 aa13.71□□□□□ -0.21
CBX3-204ENST00000456948 SPANXCQ9NY87 97 aa13.71□□□□□ -0.21
CBX3-204ENST00000456948 ANAPC11Q9NYG5 84 aa13.71□□□□□ -0.21
CBX3-204ENST00000456948 IGLV6-57P01721 117 aa13.69□□□□□ -0.22
CBX3-204ENST00000456948 HINT1P49773 126 aaPredicted RBP13.69□□□□□ -0.22
CBX3-204ENST00000456948 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
CBX3-204ENST00000456948 ATOH7Q8N100 152 aa13.69□□□□□ -0.22
CBX3-204ENST00000456948 LITAFQ99732 161 aa13.68□□□□□ -0.22
CBX3-204ENST00000456948 HIST1H2BLQ99880 126 aa13.68□□□□□ -0.22
CBX3-204ENST00000456948 TRAV23DV6A0A075B6W5 121 aa13.67□□□□□ -0.22
CBX3-204ENST00000456948 HSBP1L1C9JCN9 74 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms