RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
COPS7A-202ENST00000455113 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
COPS7A-202ENST00000455113 PFN2P35080 140 aa11.23□□□□□ -0.61
COPS7A-202ENST00000455113 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
COPS7A-202ENST00000455113 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
COPS7A-202ENST00000455113 A0A0U1RRA0 63 aa11.22□□□□□ -0.61
COPS7A-202ENST00000455113 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
COPS7A-202ENST00000455113 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
COPS7A-202ENST00000455113 LINC00587B1AMM8 73 aa11.21□□□□□ -0.61
COPS7A-202ENST00000455113 TSTD3H0UI37 97 aa11.21□□□□□ -0.61
COPS7A-202ENST00000455113 PTTG1IPP53801 180 aa11.21□□□□□ -0.61
COPS7A-202ENST00000455113 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.61
COPS7A-202ENST00000455113 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
COPS7A-202ENST00000455113 LINC00158P58513 81 aa11.21□□□□□ -0.62
COPS7A-202ENST00000455113 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-202ENST00000455113 COX17Q14061 63 aa11.2□□□□□ -0.62
COPS7A-202ENST00000455113 C2orf91Q6ZV80 131 aa11.2□□□□□ -0.62
COPS7A-202ENST00000455113 LITAFQ99732 161 aa11.2□□□□□ -0.62
COPS7A-202ENST00000455113 J3QL48 77 aa11.19□□□□□ -0.62
COPS7A-202ENST00000455113 TIMM17BO60830 172 aa11.19□□□□□ -0.62
COPS7A-202ENST00000455113 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
COPS7A-202ENST00000455113 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
COPS7A-202ENST00000455113 TMEM238C9JI98 176 aa11.18□□□□□ -0.62
COPS7A-202ENST00000455113 DAND5Q8N907 189 aa11.18□□□□□ -0.62
COPS7A-202ENST00000455113 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
COPS7A-202ENST00000455113 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
COPS7A-202ENST00000455113 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
COPS7A-202ENST00000455113 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
COPS7A-202ENST00000455113 HNRNPA3P51991 378 aaKnown RBP11.15□□□□□ -0.62
COPS7A-202ENST00000455113 Q6ZRP5 223 aa11.15□□□□□ -0.62
COPS7A-202ENST00000455113 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
COPS7A-202ENST00000455113 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
COPS7A-202ENST00000455113 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
COPS7A-202ENST00000455113 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
COPS7A-202ENST00000455113 SPANXDQ9BXN6 97 aa11.13□□□□□ -0.63
COPS7A-202ENST00000455113 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
COPS7A-202ENST00000455113 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-202ENST00000455113 NPC2P61916 151 aa11.12□□□□□ -0.63
COPS7A-202ENST00000455113 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
COPS7A-202ENST00000455113 Q6ZVH6 145 aa11.12□□□□□ -0.63
COPS7A-202ENST00000455113 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
COPS7A-202ENST00000455113 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
COPS7A-202ENST00000455113 OXTP01178 125 aa11.1□□□□□ -0.63
COPS7A-202ENST00000455113 DDTP30046 118 aa11.1□□□□□ -0.63
COPS7A-202ENST00000455113 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
COPS7A-202ENST00000455113 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-202ENST00000455113 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-202ENST00000455113 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
COPS7A-202ENST00000455113 SOSTDC1Q6X4U4 206 aa11.09□□□□□ -0.63
COPS7A-202ENST00000455113 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
COPS7A-202ENST00000455113 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
COPS7A-202ENST00000455113 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
COPS7A-202ENST00000455113 TAL2Q16559 108 aa11.08□□□□□ -0.64
COPS7A-202ENST00000455113 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
COPS7A-202ENST00000455113 IFITM1P13164 125 aa11.07□□□□□ -0.64
COPS7A-202ENST00000455113 CTAG1AP78358 180 aa11.07□□□□□ -0.64
COPS7A-202ENST00000455113 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
COPS7A-202ENST00000455113 HSD52Q0P140 79 aa11.06□□□□□ -0.64
COPS7A-202ENST00000455113 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
COPS7A-202ENST00000455113 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
COPS7A-202ENST00000455113 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
COPS7A-202ENST00000455113 CEND1Q8N111 149 aa11.05□□□□□ -0.64
COPS7A-202ENST00000455113 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
COPS7A-202ENST00000455113 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-202ENST00000455113 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
COPS7A-202ENST00000455113 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
COPS7A-202ENST00000455113 Q8NDZ9 215 aa11.02□□□□□ -0.65
COPS7A-202ENST00000455113 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
COPS7A-202ENST00000455113 A4D1N5 150 aa11.01□□□□□ -0.65
COPS7A-202ENST00000455113 FXYD2P54710 66 aa11□□□□□ -0.65
COPS7A-202ENST00000455113 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
COPS7A-202ENST00000455113 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
COPS7A-202ENST00000455113 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
COPS7A-202ENST00000455113 PLA2G2DQ9UNK4 145 aa10.99□□□□□ -0.65
COPS7A-202ENST00000455113 M0QXV9 152 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 NDUFC2O95298 119 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 VPREB1P12018 145 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 KRTAP7-1Q8IUC3 87 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 UBE2BP63146 152 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
COPS7A-202ENST00000455113 M0R143 59 aa10.97□□□□□ -0.65
COPS7A-202ENST00000455113 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
COPS7A-202ENST00000455113 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 A6NJY4 79 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 NCR3O14931 201 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 REG3GQ6UW15 175 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
COPS7A-202ENST00000455113 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
COPS7A-202ENST00000455113 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
COPS7A-202ENST00000455113 C22orf24Q9Y442 160 aa10.93□□□□□ -0.66
COPS7A-202ENST00000455113 HERC1Q15751 4861 aa10.93□□□□□ -0.66
COPS7A-202ENST00000455113 CFC1BP0CG36 223 aa10.92□□□□□ -0.66
COPS7A-202ENST00000455113 CFC1P0CG37 223 aa10.92□□□□□ -0.66
COPS7A-202ENST00000455113 BATFQ16520 125 aa10.92□□□□□ -0.66
COPS7A-202ENST00000455113 LRP1Q07954 4544 aaKnown RBP10.92□□□□□ -0.66
COPS7A-202ENST00000455113 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
COPS7A-202ENST00000455113 LBHQ53QV2 105 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms