RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ESRGQ1W209 222 aa10.81□□□□□ -0.68
SNX17-204ENST00000453453 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
SNX17-204ENST00000453453 CCL18P55774 89 aa10.8□□□□□ -0.68
SNX17-204ENST00000453453 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
SNX17-204ENST00000453453 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
SNX17-204ENST00000453453 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
SNX17-204ENST00000453453 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
SNX17-204ENST00000453453 IGKV2-28A0A075B6P5 120 aa10.78□□□□□ -0.68
SNX17-204ENST00000453453 IGKV2D-28P01615 120 aa10.78□□□□□ -0.68
SNX17-204ENST00000453453 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
SNX17-204ENST00000453453 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.68
SNX17-204ENST00000453453 SMIM11BQ8TCY0 68 aa10.77□□□□□ -0.68
SNX17-204ENST00000453453 APLNQ9ULZ1 77 aa10.77□□□□□ -0.68
SNX17-204ENST00000453453 ATP5EP2Q5VTU8 51 aa10.76□□□□□ -0.69
SNX17-204ENST00000453453 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
SNX17-204ENST00000453453 TMEM258P61165 79 aa10.76□□□□□ -0.69
SNX17-204ENST00000453453 MUC7Q8TAX7 377 aa10.76□□□□□ -0.69
SNX17-204ENST00000453453 LINC00167Q96N53 147 aa10.76□□□□□ -0.69
SNX17-204ENST00000453453 WFDC10BQ8IUB3 73 aa10.75□□□□□ -0.69
SNX17-204ENST00000453453 SERP2Q8N6R1 65 aa10.75□□□□□ -0.69
SNX17-204ENST00000453453 IGLV4-60A0A075B6I1 120 aa10.74□□□□□ -0.69
SNX17-204ENST00000453453 UBE2DNLQ8IWF7 75 aa10.74□□□□□ -0.69
SNX17-204ENST00000453453 LINC01561Q8N1V8 128 aa10.74□□□□□ -0.69
SNX17-204ENST00000453453 Q9HAA7 133 aa10.74□□□□□ -0.69
SNX17-204ENST00000453453 LINC00588Q9Y4M8 146 aa10.74□□□□□ -0.69
SNX17-204ENST00000453453 ANGP03950 147 aaKnown RBP10.73□□□□□ -0.69
SNX17-204ENST00000453453 A0A087WYN8 130 aa10.73□□□□□ -0.69
SNX17-204ENST00000453453 A0A087WZ39 114 aa10.73□□□□□ -0.69
SNX17-204ENST00000453453 LINC00158P58513 81 aa10.73□□□□□ -0.69
SNX17-204ENST00000453453 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
SNX17-204ENST00000453453 ORMDL1Q9P0S3 153 aa10.72□□□□□ -0.69
SNX17-204ENST00000453453 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
SNX17-204ENST00000453453 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.69
SNX17-204ENST00000453453 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
SNX17-204ENST00000453453 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.69
SNX17-204ENST00000453453 LINC00269Q8N2A0 174 aa10.7□□□□□ -0.7
SNX17-204ENST00000453453 C14orf132Q9NPU4 83 aa10.7□□□□□ -0.7
SNX17-204ENST00000453453 CCKP06307 115 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 SS18Q15532 418 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 Q8N3U1 123 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 OR13C6PQ8NH95 151 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 LECT2O14960 151 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 REG3AQ06141 175 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 C5orf47Q569G3 176 aa10.69□□□□□ -0.7
SNX17-204ENST00000453453 DYNC2H1Q8NCM8 4307 aaKnown RBP10.68□□□□□ -0.7
SNX17-204ENST00000453453 TRBV10-3A0A0K0K1G6 114 aa10.68□□□□□ -0.7
SNX17-204ENST00000453453 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
SNX17-204ENST00000453453 DNAH7Q8WXX0 4024 aa10.67□□□□□ -0.7
SNX17-204ENST00000453453 BCE1O60756 84 aa10.67□□□□□ -0.7
SNX17-204ENST00000453453 TGP01266 2768 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 USP17L23D6RBM5 183 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 hADV29S1A0JD25 119 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 C3orf84H3BNL1 204 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 NDUFC2O95298 119 aa10.66□□□□□ -0.7
SNX17-204ENST00000453453 Q8IZM0 81 aa10.65□□□□□ -0.7
SNX17-204ENST00000453453 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
SNX17-204ENST00000453453 IGKV3D-7A0A0C4DH55 119 aa10.63□□□□□ -0.71
SNX17-204ENST00000453453 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
SNX17-204ENST00000453453 C9orf129Q5T035 196 aaKnown RBP10.63□□□□□ -0.71
SNX17-204ENST00000453453 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
SNX17-204ENST00000453453 XCL1P47992 114 aa10.62□□□□□ -0.71
SNX17-204ENST00000453453 COX17Q14061 63 aa10.62□□□□□ -0.71
SNX17-204ENST00000453453 ENHOQ6UWT2 76 aa10.62□□□□□ -0.71
SNX17-204ENST00000453453 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
SNX17-204ENST00000453453 IGLV10-54A0A075B6I4 117 aa10.61□□□□□ -0.71
SNX17-204ENST00000453453 H3BQ85 93 aa10.61□□□□□ -0.71
SNX17-204ENST00000453453 NCR3O14931 201 aa10.61□□□□□ -0.71
SNX17-204ENST00000453453 CASC10Q5T4H9 136 aa10.61□□□□□ -0.71
SNX17-204ENST00000453453 DPH3Q96FX2 82 aa10.6□□□□□ -0.71
SNX17-204ENST00000453453 CSMD3Q7Z407 3707 aa10.6□□□□□ -0.71
SNX17-204ENST00000453453 LOC107984640A0A0U1RRK4 108 aa10.59□□□□□ -0.71
SNX17-204ENST00000453453 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
SNX17-204ENST00000453453 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
SNX17-204ENST00000453453 Q8N814 137 aa10.59□□□□□ -0.71
SNX17-204ENST00000453453 RMI2Q96E14 147 aa10.59□□□□□ -0.71
SNX17-204ENST00000453453 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
SNX17-204ENST00000453453 PFN2P35080 140 aa10.58□□□□□ -0.72
SNX17-204ENST00000453453 UBL5Q9BZL1 73 aa10.56□□□□□ -0.72
SNX17-204ENST00000453453 TENM2Q9NT68 2774 aa10.56□□□□□ -0.72
SNX17-204ENST00000453453 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
SNX17-204ENST00000453453 STARD9Q9P2P6 4700 aa10.55□□□□□ -0.72
SNX17-204ENST00000453453 A0A087WVE0 104 aa10.55□□□□□ -0.72
SNX17-204ENST00000453453 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
SNX17-204ENST00000453453 LOC110117498A0A087WWA1 95 aa10.54□□□□□ -0.72
SNX17-204ENST00000453453 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
SNX17-204ENST00000453453 GHRHP01286 108 aa10.53□□□□□ -0.72
SNX17-204ENST00000453453 SLPIP03973 132 aa10.53□□□□□ -0.72
SNX17-204ENST00000453453 CYSTM1Q9H1C7 97 aa10.53□□□□□ -0.72
SNX17-204ENST00000453453 PDE6GP18545 87 aa10.52□□□□□ -0.73
SNX17-204ENST00000453453 LY6G6CO95867 125 aa10.51□□□□□ -0.73
SNX17-204ENST00000453453 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
SNX17-204ENST00000453453 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
SNX17-204ENST00000453453 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
SNX17-204ENST00000453453 KRTAP1-5Q9BYS1 174 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms