RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
SHMT2-203ENST00000449049 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
SHMT2-203ENST00000449049 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
SHMT2-203ENST00000449049 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
SHMT2-203ENST00000449049 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
SHMT2-203ENST00000449049 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-203ENST00000449049 A0A0J9YXY3 114 aa9.11□□□□□ -0.95
SHMT2-203ENST00000449049 XGP55808 180 aa9.1□□□□□ -0.95
SHMT2-203ENST00000449049 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-203ENST00000449049 RYR3Q15413 4870 aa9.09□□□□□ -0.95
SHMT2-203ENST00000449049 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-203ENST00000449049 C9orf163Q8N9P6 203 aa9.09□□□□□ -0.95
SHMT2-203ENST00000449049 FAT2Q9NYQ8 4349 aa9.08□□□□□ -0.96
SHMT2-203ENST00000449049 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
SHMT2-203ENST00000449049 COX17Q14061 63 aa9.08□□□□□ -0.96
SHMT2-203ENST00000449049 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
SHMT2-203ENST00000449049 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
SHMT2-203ENST00000449049 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
SHMT2-203ENST00000449049 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
SHMT2-203ENST00000449049 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
SHMT2-203ENST00000449049 TIMM17BO60830 172 aa9.07□□□□□ -0.96
SHMT2-203ENST00000449049 PFN2P35080 140 aa9.06□□□□□ -0.96
SHMT2-203ENST00000449049 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
SHMT2-203ENST00000449049 C5orf47Q569G3 176 aa9.06□□□□□ -0.96
SHMT2-203ENST00000449049 LITAFQ99732 161 aa9.06□□□□□ -0.96
SHMT2-203ENST00000449049 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
SHMT2-203ENST00000449049 PSMB2P49721 201 aa9.05□□□□□ -0.96
SHMT2-203ENST00000449049 CIRBPQ14011 172 aaKnown RBP9.05□□□□□ -0.96
SHMT2-203ENST00000449049 PPDPFLQ8WWR9 84 aa9.05□□□□□ -0.96
SHMT2-203ENST00000449049 LOC107984640A0A0U1RRK4 108 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 M0QXV9 152 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 LINC00158P58513 81 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
SHMT2-203ENST00000449049 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
SHMT2-203ENST00000449049 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
SHMT2-203ENST00000449049 Q6ZRP5 223 aa9.03□□□□□ -0.96
SHMT2-203ENST00000449049 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
SHMT2-203ENST00000449049 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.96
SHMT2-203ENST00000449049 SRSF9Q13242 221 aaKnown RBP eCLIP9.02□□□□□ -0.96
SHMT2-203ENST00000449049 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.96
SHMT2-203ENST00000449049 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.96
SHMT2-203ENST00000449049 MIR7-3HGQ8N6C7 128 aa9.02□□□□□ -0.96
SHMT2-203ENST00000449049 TRBV20-1A0A075B6N2 111 aa9.02□□□□□ -0.97
SHMT2-203ENST00000449049 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
SHMT2-203ENST00000449049 RPL18AQ02543 176 aaKnown RBP9.02□□□□□ -0.97
SHMT2-203ENST00000449049 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.97
SHMT2-203ENST00000449049 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
SHMT2-203ENST00000449049 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
SHMT2-203ENST00000449049 DAND5Q8N907 189 aa9.01□□□□□ -0.97
SHMT2-203ENST00000449049 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
SHMT2-203ENST00000449049 PKD1P98161 4303 aa9.01□□□□□ -0.97
SHMT2-203ENST00000449049 C16orf90A8MZG2 172 aa9□□□□□ -0.97
SHMT2-203ENST00000449049 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
SHMT2-203ENST00000449049 A0A096LNI7 61 aa8.99□□□□□ -0.97
SHMT2-203ENST00000449049 TCL1BO95988 128 aa8.99□□□□□ -0.97
SHMT2-203ENST00000449049 GAGE2BQ13066 116 aa8.99□□□□□ -0.97
SHMT2-203ENST00000449049 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
SHMT2-203ENST00000449049 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
SHMT2-203ENST00000449049 TMEM126AQ9H061 195 aa8.98□□□□□ -0.97
SHMT2-203ENST00000449049 CFC1BP0CG36 223 aa8.98□□□□□ -0.97
SHMT2-203ENST00000449049 CFC1P0CG37 223 aa8.98□□□□□ -0.97
SHMT2-203ENST00000449049 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
SHMT2-203ENST00000449049 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
SHMT2-203ENST00000449049 SOSTDC1Q6X4U4 206 aa8.97□□□□□ -0.97
SHMT2-203ENST00000449049 LINC00308Q8TCZ7 52 aa8.97□□□□□ -0.97
SHMT2-203ENST00000449049 A4D1N5 150 aa8.96□□□□□ -0.97
SHMT2-203ENST00000449049 IFITM1P13164 125 aa8.96□□□□□ -0.97
SHMT2-203ENST00000449049 IGKV2-24A0A0C4DH68 120 aa8.96□□□□□ -0.98
SHMT2-203ENST00000449049 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-203ENST00000449049 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
SHMT2-203ENST00000449049 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
SHMT2-203ENST00000449049 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 NPC2P61916 151 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 Q6Q795 121 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 HECTD4Q9Y4D8 3996 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 PANO1I0J062 215 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 SPACA4Q8TDM5 124 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
SHMT2-203ENST00000449049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-203ENST00000449049 SCGB1C2P0DMR2 95 aa8.94□□□□□ -0.98
SHMT2-203ENST00000449049 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
SHMT2-203ENST00000449049 Q6ZSA8 131 aa8.93□□□□□ -0.98
SHMT2-203ENST00000449049 SLC25A20O43772 301 aa8.92□□□□□ -0.98
SHMT2-203ENST00000449049 SNCGO76070 127 aa8.92□□□□□ -0.98
SHMT2-203ENST00000449049 Q8NDZ9 215 aa8.92□□□□□ -0.98
SHMT2-203ENST00000449049 FAM168BA1KXE4 195 aa8.91□□□□□ -0.98
SHMT2-203ENST00000449049 NDUFC2O95298 119 aa8.91□□□□□ -0.98
SHMT2-203ENST00000449049 VPREB1P12018 145 aa8.9□□□□□ -0.98
SHMT2-203ENST00000449049 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
SHMT2-203ENST00000449049 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
SHMT2-203ENST00000449049 LINC01600Q96MT4 127 aa8.9□□□□□ -0.98
SHMT2-203ENST00000449049 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.98
SHMT2-203ENST00000449049 A0A1W2PNN7 141 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms