RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 TMEM238C9JI98 176 aa13.47□□□□□ -0.25
NME4-206ENST00000448828 PRLHP81277 87 aa13.47□□□□□ -0.25
NME4-206ENST00000448828 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 TRGC2P03986 189 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 PRR4Q16378 134 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 MEIG1Q5JSS6 88 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 TYMSOSQ8TAI1 123 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 ANAPC11Q9NYG5 84 aa13.46□□□□□ -0.25
NME4-206ENST00000448828 TSPAN13O95857 204 aa13.45□□□□□ -0.26
NME4-206ENST00000448828 TMEM126AQ9H061 195 aa13.45□□□□□ -0.26
NME4-206ENST00000448828 KRTAP13-1Q8IUC0 172 aa13.44□□□□□ -0.26
NME4-206ENST00000448828 Q8NDZ9 215 aa13.44□□□□□ -0.26
NME4-206ENST00000448828 SERF1AO75920 110 aa13.41□□□□□ -0.26
NME4-206ENST00000448828 LEPROTL1O95214 131 aa13.41□□□□□ -0.26
NME4-206ENST00000448828 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
NME4-206ENST00000448828 M0R378 163 aa13.4□□□□□ -0.26
NME4-206ENST00000448828 HERV-K104P63124 156 aa13.38□□□□□ -0.27
NME4-206ENST00000448828 BOD1L2Q8IYS8 172 aa13.38□□□□□ -0.27
NME4-206ENST00000448828 SLC7A5P1Q8MH63 180 aa13.38□□□□□ -0.27
NME4-206ENST00000448828 NDUFA12Q9UI09 145 aa13.38□□□□□ -0.27
NME4-206ENST00000448828 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
NME4-206ENST00000448828 NCR3O14931 201 aa13.36□□□□□ -0.27
NME4-206ENST00000448828 HIGD2AQ9BW72 106 aa13.36□□□□□ -0.27
NME4-206ENST00000448828 MYMXA0A1B0GTQ4 84 aa13.35□□□□□ -0.27
NME4-206ENST00000448828 FABP4P15090 132 aa13.35□□□□□ -0.27
NME4-206ENST00000448828 LINC00310P59036 64 aa13.35□□□□□ -0.27
NME4-206ENST00000448828 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
NME4-206ENST00000448828 IGKV2D-26A0A0A0MRZ7 120 aa13.34□□□□□ -0.27
NME4-206ENST00000448828 FAM229BQ4G0N7 80 aa13.34□□□□□ -0.27
NME4-206ENST00000448828 KRTAP13-2Q52LG2 175 aa13.34□□□□□ -0.27
NME4-206ENST00000448828 LINC00587B1AMM8 73 aa13.33□□□□□ -0.28
NME4-206ENST00000448828 PLNP26678 52 aa13.33□□□□□ -0.28
NME4-206ENST00000448828 MAP1LC3CQ9BXW4 147 aa13.33□□□□□ -0.28
NME4-206ENST00000448828 RNF213Q63HN8 5207 aa13.33□□□□□ -0.28
NME4-206ENST00000448828 LPAP08519 4548 aa13.32□□□□□ -0.28
NME4-206ENST00000448828 PMCHL2Q9BQD1 86 aa13.31□□□□□ -0.28
NME4-206ENST00000448828 LEPROTO15243 131 aa13.3□□□□□ -0.28
NME4-206ENST00000448828 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
NME4-206ENST00000448828 HERVK_113P61574 105 aa13.3□□□□□ -0.28
NME4-206ENST00000448828 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
NME4-206ENST00000448828 DPM2O94777 84 aa13.29□□□□□ -0.28
NME4-206ENST00000448828 LINC00304Q8N9R0 145 aa13.29□□□□□ -0.28
NME4-206ENST00000448828 PRYO14603 147 aa13.28□□□□□ -0.28
NME4-206ENST00000448828 DAND5Q8N907 189 aa13.28□□□□□ -0.28
NME4-206ENST00000448828 COLCA2A8K830 154 aa13.27□□□□□ -0.29
NME4-206ENST00000448828 J3QQQ9 107 aa13.26□□□□□ -0.29
NME4-206ENST00000448828 IGKCP01834 107 aa13.26□□□□□ -0.29
NME4-206ENST00000448828 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
NME4-206ENST00000448828 S100A12P80511 92 aa13.25□□□□□ -0.29
NME4-206ENST00000448828 ETDCA0A1B0GVM5 59 aa13.24□□□□□ -0.29
NME4-206ENST00000448828 RETNLBQ9BQ08 111 aa13.24□□□□□ -0.29
NME4-206ENST00000448828 TRBV10-3A0A0K0K1G6 114 aa13.23□□□□□ -0.29
NME4-206ENST00000448828 MIEN1Q9BRT3 115 aa13.23□□□□□ -0.29
NME4-206ENST00000448828 ZNF706Q9Y5V0 76 aaPredicted RBP13.23□□□□□ -0.29
NME4-206ENST00000448828 C3orf22Q8N5N4 141 aa13.22□□□□□ -0.29
NME4-206ENST00000448828 NMUP48645 174 aa13.21□□□□□ -0.29
NME4-206ENST00000448828 SPRR4Q96PI1 79 aa13.21□□□□□ -0.29
NME4-206ENST00000448828 KCNQ1DNQ9H478 68 aa13.21□□□□□ -0.29
NME4-206ENST00000448828 LINC00337Q8N6G1 96 aa13.2□□□□□ -0.3
NME4-206ENST00000448828 DDTP30046 118 aa13.17□□□□□ -0.3
NME4-206ENST00000448828 SPRR1AP35321 89 aa13.17□□□□□ -0.3
NME4-206ENST00000448828 NPC2P61916 151 aa13.16□□□□□ -0.3
NME4-206ENST00000448828 SMCR5Q8TEV8 140 aa13.16□□□□□ -0.3
NME4-206ENST00000448828 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
NME4-206ENST00000448828 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
NME4-206ENST00000448828 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
NME4-206ENST00000448828 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BKO60814 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BJP06899 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BOP23527 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BBP33778 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BDP58876 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BCP62807 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST2H2BEQ16778 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BHQ93079 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BNQ99877 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 HIST1H2BMQ99879 126 aa13.13□□□□□ -0.31
NME4-206ENST00000448828 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
NME4-206ENST00000448828 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
NME4-206ENST00000448828 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
NME4-206ENST00000448828 E9PLD3 99 aa13.11□□□□□ -0.31
NME4-206ENST00000448828 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
NME4-206ENST00000448828 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
NME4-206ENST00000448828 B5MCH6 92 aa13.1□□□□□ -0.31
NME4-206ENST00000448828 C4orf48Q5BLP8 95 aa13.1□□□□□ -0.31
NME4-206ENST00000448828 GAGE2AQ6NT46 116 aa13.09□□□□□ -0.31
NME4-206ENST00000448828 SPAG11AQ6PDA7 123 aa13.08□□□□□ -0.32
NME4-206ENST00000448828 NDUFC2O95298 119 aa13.07□□□□□ -0.32
NME4-206ENST00000448828 Q8NBF4 154 aa13.07□□□□□ -0.32
NME4-206ENST00000448828 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
NME4-206ENST00000448828 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
NME4-206ENST00000448828 ADAMTSL4-AS1Q5T5F5 129 aa13.06□□□□□ -0.32
NME4-206ENST00000448828 SOSTDC1Q6X4U4 206 aa13.06□□□□□ -0.32
NME4-206ENST00000448828 CTAG1AP78358 180 aa13.05□□□□□ -0.32
NME4-206ENST00000448828 Q6ZRX8 168 aa13.05□□□□□ -0.32
NME4-206ENST00000448828 CDIP1Q9H305 208 aa13.05□□□□□ -0.32
NME4-206ENST00000448828 ERC2-IT1O76042 136 aa13.04□□□□□ -0.32
NME4-206ENST00000448828 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
NME4-206ENST00000448828 IGLV9-49A0A0B4J1Y8 123 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms