RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
CTDSPL-207ENST00000447745 HERC1Q15751 4861 aa6.39□□□□□ -1.39
CTDSPL-207ENST00000447745 NDUFA1O15239 70 aa6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 PTTG1IPP53801 180 aa6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 HERVK_113P63121 156 aa6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
CTDSPL-207ENST00000447745 J3QQQ9 107 aa6.37□□□□□ -1.39
CTDSPL-207ENST00000447745 CDKN2A-AS1Q9UH64 79 aa6.37□□□□□ -1.39
CTDSPL-207ENST00000447745 ZNF815PA8K554 130 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 H3BRM9 83 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 RPL18AQ02543 176 aaKnown RBP6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 BATFQ16520 125 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 C6orf48Q9UBA6 75 aa6.36□□□□□ -1.39
CTDSPL-207ENST00000447745 IGLV5-39A0A0G2JS06 123 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 PRSS2P07478 247 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 LGALS3P17931 250 aaKnown RBP6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 TSPEAR-AS2P59090 65 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 C6orf226Q5I0X4 101 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 LINC00469Q8N7U9 141 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 TOMM7Q9P0U1 55 aa6.35□□□□□ -1.39
CTDSPL-207ENST00000447745 TLX1NBP0CAT3 122 aa6.34□□□□□ -1.39
CTDSPL-207ENST00000447745 Q6ZRP5 223 aa6.34□□□□□ -1.39
CTDSPL-207ENST00000447745 CEND1Q8N111 149 aa6.34□□□□□ -1.39
CTDSPL-207ENST00000447745 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL-207ENST00000447745 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 A0A1B0GV90 55 aa6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 A6NDN8 102 aa6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 CKS1BP61024 79 aa6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 Q8IZM0 81 aa6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL-207ENST00000447745 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
CTDSPL-207ENST00000447745 GAGE2EQ4V326 116 aa6.32□□□□□ -1.4
CTDSPL-207ENST00000447745 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
CTDSPL-207ENST00000447745 GAGE2DQ9UEU5 116 aa6.32□□□□□ -1.4
CTDSPL-207ENST00000447745 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 NDUFC2-KCTD14E9PQ53 114 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 J3QL48 77 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 TAX1BP3O14907 124 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 TIMM17BO60830 172 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 SCGB1D4Q6XE38 83 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
CTDSPL-207ENST00000447745 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 A0A1B0GWB2 263 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 FAM168BA1KXE4 195 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 FXYD2P54710 66 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 Q6ZVH6 145 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
CTDSPL-207ENST00000447745 OXTP01178 125 aa6.29□□□□□ -1.4
CTDSPL-207ENST00000447745 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
CTDSPL-207ENST00000447745 CXCL5P42830 114 aa6.29□□□□□ -1.4
CTDSPL-207ENST00000447745 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
CTDSPL-207ENST00000447745 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
CTDSPL-207ENST00000447745 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 HERV-K104P63124 156 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 LITAFQ99732 161 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
CTDSPL-207ENST00000447745 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 A6NJY4 79 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 SFTA2Q6UW10 78 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 TNXBP22105 4242 aa6.27□□□□□ -1.41
CTDSPL-207ENST00000447745 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
CTDSPL-207ENST00000447745 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
CTDSPL-207ENST00000447745 IFITM1P13164 125 aa6.25□□□□□ -1.41
CTDSPL-207ENST00000447745 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CTDSPL-207ENST00000447745 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 NHP2Q9NX24 153 aaKnown RBP6.24□□□□□ -1.41
CTDSPL-207ENST00000447745 M0QXV9 152 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 CFC1P0CG37 223 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 SERTAD4-AS1Q5TG53 156 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 C22orf24Q9Y442 160 aa6.23□□□□□ -1.41
CTDSPL-207ENST00000447745 UBE2BP63146 152 aa6.22□□□□□ -1.41
CTDSPL-207ENST00000447745 UBE2V1Q13404 147 aa6.22□□□□□ -1.41
CTDSPL-207ENST00000447745 A0A0B4J2C4 111 aa6.21□□□□□ -1.42
CTDSPL-207ENST00000447745 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
CTDSPL-207ENST00000447745 A4D1N5 150 aa6.21□□□□□ -1.42
CTDSPL-207ENST00000447745 K7ERJ3 54 aa6.21□□□□□ -1.42
CTDSPL-207ENST00000447745 PFN2P35080 140 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms