RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 M0R378 163 aa13.9□□□□□ -0.18
PMS1-214ENST00000446877 VPREB1P12018 145 aa13.9□□□□□ -0.18
PMS1-214ENST00000446877 KIAA1644Q3SXP7 199 aa13.89□□□□□ -0.19
PMS1-214ENST00000446877 HIGD2AQ9BW72 106 aa13.89□□□□□ -0.19
PMS1-214ENST00000446877 SND1-IT1Q9HBX3 110 aa13.89□□□□□ -0.19
PMS1-214ENST00000446877 FABP9Q0Z7S8 132 aa13.88□□□□□ -0.19
PMS1-214ENST00000446877 PMVKQ15126 192 aa13.88□□□□□ -0.19
PMS1-214ENST00000446877 TRAPPC1Q9Y5R8 145 aa13.87□□□□□ -0.19
PMS1-214ENST00000446877 ERG28Q9UKR5 140 aa13.85□□□□□ -0.19
PMS1-214ENST00000446877 ASB16-AS1Q495Z4 193 aa13.84□□□□□ -0.19
PMS1-214ENST00000446877 COX17Q14061 63 aa13.83□□□□□ -0.2
PMS1-214ENST00000446877 KRTAP13-3Q3SY46 172 aa13.82□□□□□ -0.2
PMS1-214ENST00000446877 SPRR4Q96PI1 79 aa13.82□□□□□ -0.2
PMS1-214ENST00000446877 ZNF706Q9Y5V0 76 aaPredicted RBP13.82□□□□□ -0.2
PMS1-214ENST00000446877 IGLV5-39A0A0G2JS06 123 aa13.81□□□□□ -0.2
PMS1-214ENST00000446877 FSIP2Q5CZC0 6907 aa13.81□□□□□ -0.2
PMS1-214ENST00000446877 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
PMS1-214ENST00000446877 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
PMS1-214ENST00000446877 SEC61BP60468 96 aaKnown RBP13.79□□□□□ -0.2
PMS1-214ENST00000446877 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
PMS1-214ENST00000446877 Q8NBF4 154 aa13.78□□□□□ -0.2
PMS1-214ENST00000446877 COLCA2A8K830 154 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 IGLC3P0DOY3 106 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 S100A1P23297 94 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 NDUFA6P56556 154 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 FA2HQ7L5A8 372 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 DAND5Q8N907 189 aa13.77□□□□□ -0.21
PMS1-214ENST00000446877 Q8NDZ9 215 aa13.76□□□□□ -0.21
PMS1-214ENST00000446877 SPINK1P00995 79 aa13.75□□□□□ -0.21
PMS1-214ENST00000446877 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
PMS1-214ENST00000446877 ZNF22P17026 224 aaPredicted RBP13.73□□□□□ -0.21
PMS1-214ENST00000446877 C18orf32Q8TCD1 76 aa13.72□□□□□ -0.21
PMS1-214ENST00000446877 NDUFA12Q9UI09 145 aa13.72□□□□□ -0.21
PMS1-214ENST00000446877 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
PMS1-214ENST00000446877 LINC00158P58513 81 aa13.71□□□□□ -0.21
PMS1-214ENST00000446877 KRTAP4-1Q9BYQ7 146 aa13.71□□□□□ -0.21
PMS1-214ENST00000446877 TRGC2P03986 189 aa13.7□□□□□ -0.22
PMS1-214ENST00000446877 CRCT1Q9UGL9 99 aa13.7□□□□□ -0.22
PMS1-214ENST00000446877 LINC00614P0C842 121 aa13.67□□□□□ -0.22
PMS1-214ENST00000446877 SMCR5Q8TEV8 140 aa13.66□□□□□ -0.22
PMS1-214ENST00000446877 PRYO14603 147 aa13.65□□□□□ -0.22
PMS1-214ENST00000446877 TMEM170BQ5T4T1 132 aa13.65□□□□□ -0.22
PMS1-214ENST00000446877 URB1-AS1Q96HZ7 61 aa13.64□□□□□ -0.23
PMS1-214ENST00000446877 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
PMS1-214ENST00000446877 FAM19A2Q8N3H0 131 aa13.63□□□□□ -0.23
PMS1-214ENST00000446877 ETDCA0A1B0GVM5 59 aa13.62□□□□□ -0.23
PMS1-214ENST00000446877 C11orf86A6NJI1 115 aa13.61□□□□□ -0.23
PMS1-214ENST00000446877 GAGE2AQ6NT46 116 aa13.6□□□□□ -0.23
PMS1-214ENST00000446877 BAGE3Q86Y29 109 aa13.6□□□□□ -0.23
PMS1-214ENST00000446877 BOD1L2Q8IYS8 172 aa13.6□□□□□ -0.23
PMS1-214ENST00000446877 CHCHD1Q96BP2 118 aaKnown RBP13.6□□□□□ -0.23
PMS1-214ENST00000446877 SPRR1AP35321 89 aa13.59□□□□□ -0.23
PMS1-214ENST00000446877 LINC00483Q53H64 154 aa13.59□□□□□ -0.23
PMS1-214ENST00000446877 KCNQ1DNQ9H478 68 aa13.59□□□□□ -0.23
PMS1-214ENST00000446877 RPS29P62273 56 aaKnown RBP13.58□□□□□ -0.24
PMS1-214ENST00000446877 A0A096LNJ9 63 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 IGLV9-49A0A0B4J1Y8 123 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 NCR3O14931 201 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 SLC25A20O43772 301 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 HBDP02042 147 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 MOBPQ13875 183 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 Q8N377 158 aa13.57□□□□□ -0.24
PMS1-214ENST00000446877 S100A12P80511 92 aa13.56□□□□□ -0.24
PMS1-214ENST00000446877 SSBP3-AS1Q7Z2R9 100 aa13.56□□□□□ -0.24
PMS1-214ENST00000446877 XP32Q5T750 250 aa13.55□□□□□ -0.24
PMS1-214ENST00000446877 KRTAP4-16G5E9R7 235 aaPredicted RBP13.54□□□□□ -0.24
PMS1-214ENST00000446877 SMIM13P0DJ93 91 aa13.54□□□□□ -0.24
PMS1-214ENST00000446877 PMCHL1Q16048 86 aa13.53□□□□□ -0.24
PMS1-214ENST00000446877 MEIG1Q5JSS6 88 aa13.53□□□□□ -0.24
PMS1-214ENST00000446877 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.25
PMS1-214ENST00000446877 TRBV10-3A0A0K0K1G6 114 aa13.51□□□□□ -0.25
PMS1-214ENST00000446877 HSBP1O75506 76 aa13.51□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BKO60814 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 SERF1AO75920 110 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BJP06899 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BOP23527 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BBP33778 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BDP58876 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BCP62807 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST2H2BEQ16778 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.5□□□□□ -0.25
PMS1-214ENST00000446877 MIR7-3HGQ8N6C7 128 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BHQ93079 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BNQ99877 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 HIST1H2BMQ99879 126 aa13.5□□□□□ -0.25
PMS1-214ENST00000446877 TMEM223A0PJW6 202 aa13.48□□□□□ -0.25
PMS1-214ENST00000446877 LINC00310P59036 64 aa13.48□□□□□ -0.25
PMS1-214ENST00000446877 LINC00587B1AMM8 73 aa13.47□□□□□ -0.25
PMS1-214ENST00000446877 B5MCH6 92 aa13.47□□□□□ -0.25
PMS1-214ENST00000446877 LCE2CQ5TA81 110 aa13.47□□□□□ -0.25
PMS1-214ENST00000446877 ERC2-IT1O76042 136 aa13.46□□□□□ -0.25
PMS1-214ENST00000446877 HERV-K104P63124 156 aa13.46□□□□□ -0.25
PMS1-214ENST00000446877 MAP1LC3CQ9BXW4 147 aa13.44□□□□□ -0.26
PMS1-214ENST00000446877 IFI27L1Q96BM0 104 aa13.42□□□□□ -0.26
PMS1-214ENST00000446877 CFC1BP0CG36 223 aa13.41□□□□□ -0.26
PMS1-214ENST00000446877 C9orf153Q5TBE3 101 aa13.41□□□□□ -0.26
PMS1-214ENST00000446877 DDTP30046 118 aa13.4□□□□□ -0.26
PMS1-214ENST00000446877 Q9BRP9 147 aa13.4□□□□□ -0.26
PMS1-214ENST00000446877 LEPROTL1O95214 131 aa13.39□□□□□ -0.27
PMS1-214ENST00000446877 COA6Q5JTJ3 125 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms