RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
TM9SF4-204ENST00000442842 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
TM9SF4-204ENST00000442842 M0QXV9 152 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 TIMM17BO60830 172 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 S100A12P80511 92 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 LITAFQ99732 161 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 MIEN1Q9BRT3 115 aa8.56□□□□□ -1.04
TM9SF4-204ENST00000442842 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
TM9SF4-204ENST00000442842 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
TM9SF4-204ENST00000442842 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
TM9SF4-204ENST00000442842 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
TM9SF4-204ENST00000442842 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
TM9SF4-204ENST00000442842 SLC25A34Q6PIV7 304 aa8.53□□□□□ -1.04
TM9SF4-204ENST00000442842 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
TM9SF4-204ENST00000442842 Q8NDZ9 215 aa8.53□□□□□ -1.04
TM9SF4-204ENST00000442842 NCR3O14931 201 aa8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 SOSTDC1Q6X4U4 206 aa8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
TM9SF4-204ENST00000442842 FAT1Q14517 4588 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 DLEU1O43261 78 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 VPREB1P12018 145 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 UBE2BP63146 152 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
TM9SF4-204ENST00000442842 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
TM9SF4-204ENST00000442842 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
TM9SF4-204ENST00000442842 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
TM9SF4-204ENST00000442842 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
TM9SF4-204ENST00000442842 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
TM9SF4-204ENST00000442842 HERC2O95714 4834 aa8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 HIST1H4GQ99525 98 aa8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 C12orf57Q99622 126 aa8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
TM9SF4-204ENST00000442842 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
TM9SF4-204ENST00000442842 Q6ZVH6 145 aa8.47□□□□□ -1.05
TM9SF4-204ENST00000442842 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
TM9SF4-204ENST00000442842 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
TM9SF4-204ENST00000442842 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 IFITM1P13164 125 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
TM9SF4-204ENST00000442842 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
TM9SF4-204ENST00000442842 M0R378 163 aa8.45□□□□□ -1.06
TM9SF4-204ENST00000442842 Q5VSD8 79 aa8.45□□□□□ -1.06
TM9SF4-204ENST00000442842 NDUFC2O95298 119 aa8.44□□□□□ -1.06
TM9SF4-204ENST00000442842 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
TM9SF4-204ENST00000442842 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
TM9SF4-204ENST00000442842 HNRNPA3P51991 378 aaKnown RBP8.43□□□□□ -1.06
TM9SF4-204ENST00000442842 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
TM9SF4-204ENST00000442842 Q8N1X5 172 aa8.42□□□□□ -1.06
TM9SF4-204ENST00000442842 OR13C6PQ8NH95 151 aa8.42□□□□□ -1.06
TM9SF4-204ENST00000442842 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
TM9SF4-204ENST00000442842 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 DDTP30046 118 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 LINC00518Q8N0U6 118 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
TM9SF4-204ENST00000442842 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.06
TM9SF4-204ENST00000442842 A4D1N5 150 aa8.4□□□□□ -1.06
TM9SF4-204ENST00000442842 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
TM9SF4-204ENST00000442842 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
TM9SF4-204ENST00000442842 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
TM9SF4-204ENST00000442842 A6NDN8 102 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 HSD52Q0P140 79 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 TAL2Q16559 108 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 CEND1Q8N111 149 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 LINC00337Q8N6G1 96 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
TM9SF4-204ENST00000442842 PRYO14603 147 aa8.37□□□□□ -1.07
TM9SF4-204ENST00000442842 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
TM9SF4-204ENST00000442842 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
TM9SF4-204ENST00000442842 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
TM9SF4-204ENST00000442842 IGLV6-57P01721 117 aa8.36□□□□□ -1.07
TM9SF4-204ENST00000442842 BCE1O60756 84 aa8.35□□□□□ -1.07
TM9SF4-204ENST00000442842 FXYD2P54710 66 aa8.35□□□□□ -1.07
TM9SF4-204ENST00000442842 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
TM9SF4-204ENST00000442842 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
TM9SF4-204ENST00000442842 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
TM9SF4-204ENST00000442842 A6NJY4 79 aa8.34□□□□□ -1.07
TM9SF4-204ENST00000442842 FAM19A1Q7Z5A9 133 aa8.34□□□□□ -1.07
TM9SF4-204ENST00000442842 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
TM9SF4-204ENST00000442842 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
TM9SF4-204ENST00000442842 UBE2AP49459 152 aa8.33□□□□□ -1.08
TM9SF4-204ENST00000442842 CTAG1AP78358 180 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms