RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 M0R378 163 aa7.98□□□□□ -1.13
PTPRE-203ENST00000442830 NDUFA6P56556 154 aa7.98□□□□□ -1.13
PTPRE-203ENST00000442830 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-203ENST00000442830 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
PTPRE-203ENST00000442830 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
PTPRE-203ENST00000442830 HBDP02042 147 aa7.97□□□□□ -1.13
PTPRE-203ENST00000442830 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
PTPRE-203ENST00000442830 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
PTPRE-203ENST00000442830 SCO1O75880 301 aa7.96□□□□□ -1.14
PTPRE-203ENST00000442830 RHEBQ15382 184 aa7.96□□□□□ -1.14
PTPRE-203ENST00000442830 LINC00614P0C842 121 aa7.95□□□□□ -1.14
PTPRE-203ENST00000442830 TMEM170BQ5T4T1 132 aa7.95□□□□□ -1.14
PTPRE-203ENST00000442830 HIGD2AQ9BW72 106 aa7.95□□□□□ -1.14
PTPRE-203ENST00000442830 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
PTPRE-203ENST00000442830 LINC00158P58513 81 aa7.93□□□□□ -1.14
PTPRE-203ENST00000442830 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
PTPRE-203ENST00000442830 ZNF625Q96I27 306 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-203ENST00000442830 SPRR4Q96PI1 79 aa7.93□□□□□ -1.14
PTPRE-203ENST00000442830 A0A096LNJ9 63 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 PRYO14603 147 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 ATP6V1G1O75348 118 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 S100A12P80511 92 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
PTPRE-203ENST00000442830 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
PTPRE-203ENST00000442830 LINC00337Q8N6G1 96 aa7.91□□□□□ -1.14
PTPRE-203ENST00000442830 C18orf32Q8TCD1 76 aa7.91□□□□□ -1.14
PTPRE-203ENST00000442830 TRAPPC1Q9Y5R8 145 aa7.91□□□□□ -1.14
PTPRE-203ENST00000442830 SPINK1P00995 79 aa7.9□□□□□ -1.14
PTPRE-203ENST00000442830 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
PTPRE-203ENST00000442830 HERV-K104P63124 156 aa7.89□□□□□ -1.15
PTPRE-203ENST00000442830 FAM19A2Q8N3H0 131 aa7.89□□□□□ -1.15
PTPRE-203ENST00000442830 RPS10P5Q9NQ39 176 aa7.89□□□□□ -1.15
PTPRE-203ENST00000442830 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
PTPRE-203ENST00000442830 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
PTPRE-203ENST00000442830 TRAV12-1A0A0B4J245 112 aa7.88□□□□□ -1.15
PTPRE-203ENST00000442830 C10orf91Q5T1B1 145 aa7.88□□□□□ -1.15
PTPRE-203ENST00000442830 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
PTPRE-203ENST00000442830 ETDCA0A1B0GVM5 59 aa7.87□□□□□ -1.15
PTPRE-203ENST00000442830 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
PTPRE-203ENST00000442830 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
PTPRE-203ENST00000442830 Q8NDZ9 215 aa7.87□□□□□ -1.15
PTPRE-203ENST00000442830 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
PTPRE-203ENST00000442830 MAP1LC3CQ9BXW4 147 aa7.87□□□□□ -1.15
PTPRE-203ENST00000442830 SPRR1AP35321 89 aa7.86□□□□□ -1.15
PTPRE-203ENST00000442830 MEIG1Q5JSS6 88 aa7.86□□□□□ -1.15
PTPRE-203ENST00000442830 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
PTPRE-203ENST00000442830 Q8NBF4 154 aa7.86□□□□□ -1.15
PTPRE-203ENST00000442830 PMCHL1Q16048 86 aa7.85□□□□□ -1.15
PTPRE-203ENST00000442830 XP32Q5T750 250 aa7.85□□□□□ -1.15
PTPRE-203ENST00000442830 COMMD7Q86VX2 200 aa7.85□□□□□ -1.15
PTPRE-203ENST00000442830 CHCHD1Q96BP2 118 aaKnown RBP7.85□□□□□ -1.15
PTPRE-203ENST00000442830 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
PTPRE-203ENST00000442830 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
PTPRE-203ENST00000442830 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
PTPRE-203ENST00000442830 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
PTPRE-203ENST00000442830 MYMXA0A1B0GTQ4 84 aa7.83□□□□□ -1.16
PTPRE-203ENST00000442830 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
PTPRE-203ENST00000442830 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
PTPRE-203ENST00000442830 SMCR5Q8TEV8 140 aa7.83□□□□□ -1.16
PTPRE-203ENST00000442830 A0A0U1RRA0 63 aa7.82□□□□□ -1.16
PTPRE-203ENST00000442830 KRTAP4-16G5E9R7 235 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-203ENST00000442830 NCR3O14931 201 aa7.82□□□□□ -1.16
PTPRE-203ENST00000442830 SSBP3-AS1Q7Z2R9 100 aa7.82□□□□□ -1.16
PTPRE-203ENST00000442830 MIR7-3HGQ8N6C7 128 aa7.82□□□□□ -1.16
PTPRE-203ENST00000442830 IFITM2Q01629 132 aa7.81□□□□□ -1.16
PTPRE-203ENST00000442830 NDUFA5Q16718 116 aa7.81□□□□□ -1.16
PTPRE-203ENST00000442830 DAND5Q8N907 189 aa7.81□□□□□ -1.16
PTPRE-203ENST00000442830 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
PTPRE-203ENST00000442830 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
PTPRE-203ENST00000442830 SNAPINO95295 136 aa7.8□□□□□ -1.16
PTPRE-203ENST00000442830 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
PTPRE-203ENST00000442830 LOC107984156A0A0G2JMH3 177 aa7.79□□□□□ -1.16
PTPRE-203ENST00000442830 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
PTPRE-203ENST00000442830 SLC25A20O43772 301 aa7.79□□□□□ -1.16
PTPRE-203ENST00000442830 ARL17AQ8IVW1 177 aa7.79□□□□□ -1.16
PTPRE-203ENST00000442830 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
PTPRE-203ENST00000442830 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
PTPRE-203ENST00000442830 SVBPQ8N300 66 aa7.78□□□□□ -1.16
PTPRE-203ENST00000442830 CBY1Q9Y3M2 126 aa7.78□□□□□ -1.16
PTPRE-203ENST00000442830 B5MCH6 92 aa7.77□□□□□ -1.17
PTPRE-203ENST00000442830 DDTP30046 118 aa7.77□□□□□ -1.17
PTPRE-203ENST00000442830 MIEN1Q9BRT3 115 aa7.77□□□□□ -1.17
PTPRE-203ENST00000442830 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
PTPRE-203ENST00000442830 HSBP1O75506 76 aa7.76□□□□□ -1.17
PTPRE-203ENST00000442830 MOBPQ13875 183 aa7.76□□□□□ -1.17
PTPRE-203ENST00000442830 Q6ZRX8 168 aa7.76□□□□□ -1.17
PTPRE-203ENST00000442830 IGLV9-49A0A0B4J1Y8 123 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 C5orf52A6NGY3 159 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 APOC3P02656 99 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 PLNP26678 52 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 NMUP48645 174 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 Q8N377 158 aa7.75□□□□□ -1.17
PTPRE-203ENST00000442830 LEPROTO15243 131 aa7.74□□□□□ -1.17
PTPRE-203ENST00000442830 NDUFC2O95298 119 aa7.74□□□□□ -1.17
PTPRE-203ENST00000442830 HERVK_113P61574 105 aa7.74□□□□□ -1.17
PTPRE-203ENST00000442830 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
PTPRE-203ENST00000442830 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
PTPRE-203ENST00000442830 Q9BRP9 147 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms