RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 IGKV1D-17A0A075B6S4 117 aa2□□□□□ -2.09
LIG4-203ENST00000442234 CLPSL1A2RUU4 121 aa2□□□□□ -2.09
LIG4-203ENST00000442234 A8MUN3 132 aa2□□□□□ -2.09
LIG4-203ENST00000442234 LCA10Q71F78 164 aa2□□□□□ -2.09
LIG4-203ENST00000442234 FAM19A3Q7Z5A8 133 aa2□□□□□ -2.09
LIG4-203ENST00000442234 GGNQ86UU5 652 aa2□□□□□ -2.09
LIG4-203ENST00000442234 HUWE1Q7Z6Z7 4374 aaKnown RBP2□□□□□ -2.09
LIG4-203ENST00000442234 A0A087WYN8 130 aa2□□□□□ -2.09
LIG4-203ENST00000442234 IGHV7-4-1A0A0J9YVY3 117 aa2□□□□□ -2.09
LIG4-203ENST00000442234 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
LIG4-203ENST00000442234 SRRM5B3KS81 715 aa2□□□□□ -2.09
LIG4-203ENST00000442234 C17orf58Q2M2W7 97 aa2□□□□□ -2.09
LIG4-203ENST00000442234 TMEM30BQ3MIR4 351 aa2□□□□□ -2.09
LIG4-203ENST00000442234 SUMO4Q6EEV6 95 aa2□□□□□ -2.09
LIG4-203ENST00000442234 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
LIG4-203ENST00000442234 SND1-IT1Q9HBX3 110 aa2□□□□□ -2.09
LIG4-203ENST00000442234 C11orf21Q9P2W6 132 aa2□□□□□ -2.09
LIG4-203ENST00000442234 MEGF8Q7Z7M0 2845 aa2□□□□□ -2.09
LIG4-203ENST00000442234 HCG22E2RYF7 251 aa2□□□□□ -2.09
LIG4-203ENST00000442234 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
LIG4-203ENST00000442234 LINC01006Q8NI28 216 aa2□□□□□ -2.09
LIG4-203ENST00000442234 PRR15LQ9BU68 103 aa2□□□□□ -2.09
LIG4-203ENST00000442234 IGLV4-3A0A075B6K6 122 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 TRAV22A0A0B4J277 110 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 BPY2O14599 106 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 PRR26Q8N8Z3 221 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 C20orf203Q8NBC4 194 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 X6R8D5 127 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 IBA57-AS1B1ANH7 110 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 KRTAP1-1Q07627 177 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 C18orf65Q6ZTR6 163 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 UBE2DNLQ8IWF7 75 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 LITAFQ99732 161 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 LINC00588Q9Y4M8 146 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 KRTAP9-6A0A140TA67 174 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 GNRH2O43555 120 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 IGKV3-20P01619 116 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 IGHV1-46P01743 117 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 LINC01547P58512 204 aaPredicted RBP1.99□□□□□ -2.09
LIG4-203ENST00000442234 C9orf129Q5T035 196 aaKnown RBP1.99□□□□□ -2.09
LIG4-203ENST00000442234 ZNF833PQ6ZTB9 187 aa1.99□□□□□ -2.09
LIG4-203ENST00000442234 IGHV4-4A0A075B6R2 117 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.98□□□□□ -2.09
LIG4-203ENST00000442234 I3L2K1 104 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 NDUFA1O15239 70 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 POLR2KP53803 58 aaKnown RBP1.98□□□□□ -2.09
LIG4-203ENST00000442234 B3GALT5-AS1P59052 145 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 SYCNQ0VAF6 134 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 COX8CQ7Z4L0 72 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 SMIM11BQ8TCY0 68 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 HIGD2AQ9BW72 106 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 CDKN2A-AS1Q9UH64 79 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 Q6ZTI0 123 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 IGHV3-73A0A0B4J1V6 119 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 K7EIM0 57 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 Q1T7F1 81 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 Q6ZRP5 223 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 COX7B2Q8TF08 81 aa1.98□□□□□ -2.09
LIG4-203ENST00000442234 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
LIG4-203ENST00000442234 GPHB5Q86YW7 130 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 WWC2-AS2Q96NR7 200 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.97□□□□□ -2.09
LIG4-203ENST00000442234 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
LIG4-203ENST00000442234 LMO4P61968 165 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 CXCL6P80162 114 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 C11orf72Q8NBR9 251 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 C1orf64Q8NEQ6 169 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 SMAD5-AS1Q9Y6J3 95 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 IGHV4OR15-8A0A075B7B6 117 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 A0A087WW49 117 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 TRBV7-4A0A0J9YYF1 115 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 hDV103S1A0JD37 113 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 CELA1Q9UNI1 258 aa1.97□□□□□ -2.09
LIG4-203ENST00000442234 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
LIG4-203ENST00000442234 MP68P56378 58 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 DIRC1Q969H9 104 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 WFDC10AQ9H1F0 79 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 IGHV3-38A0A0C4DH36 116 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 C16orf90A8MZG2 172 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 CGB3P0DN86 165 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 CGB7P0DN87 165 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 FBXL19-AS1Q494R0 122 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 C9orf47Q6ZRZ4 202 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 LINC00337Q8N6G1 96 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 MUC7Q8TAX7 377 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 GAFA1Q96PS6 74 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 FAM30AQ9NZY2 134 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 C22orf24Q9Y442 160 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
LIG4-203ENST00000442234 TRBV6-5A0A0K0K1A5 114 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 A8MU10 97 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 ERC2-IT1O76042 136 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 PDE6GP18545 87 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 PRR9Q5T870 116 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms