RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 IGHV3OR16-8A0A075B7F1 116 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 IGLV5-45A0A087WSX0 123 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 IGHV3-66A0A0C4DH42 116 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 RPL11P62913 178 aaKnown RBP4.47□□□□□ -1.69
HDAC6-210ENST00000441703 S100A7L2Q5SY68 101 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 A0A087WWL8 130 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV3-35A0A0C4DH35 117 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 TRBV10-3A0A0K0K1G6 114 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 NDUFA4O00483 81 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
HDAC6-210ENST00000441703 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 DSCR8Q96T75 97 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 X6R8D5 127 aa4.46□□□□□ -1.7
HDAC6-210ENST00000441703 TRAV13-2A0A0B4J235 113 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 H0YGX0 51 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 K7EMT4 169 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 GIG44P09565 113 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-210ENST00000441703 HTN3P15516 51 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 NPC2P61916 151 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 LYPD5Q6UWN5 251 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 FAM19A3Q7Z5A8 133 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 STHQ8IWL8 128 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV3OR16-13A0A075B7E8 117 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV3-74A0A0B4J1X5 117 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 DNAL4O96015 105 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 PFN2P35080 140 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 PIK3CD-AS1Q5SR53 167 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 DEFB104AQ8WTQ1 72 aa4.44□□□□□ -1.7
HDAC6-210ENST00000441703 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV3-49A0A0A0MS15 119 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 TRAV12-3A0A0B4J271 114 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 PLA2G1BP04054 148 aaKnown RBP4.43□□□□□ -1.7
HDAC6-210ENST00000441703 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 CHCHD7Q9BUK0 85 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 RHPN1-AS1Q9BWJ2 59 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 LINC00846Q9NV44 126 aa4.43□□□□□ -1.7
HDAC6-210ENST00000441703 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 CCKP06307 115 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
HDAC6-210ENST00000441703 CCL18P55774 89 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 DEFB131AP59861 70 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 HAMPP81172 84 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 FHL2Q14192 279 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 SOSTDC1Q6X4U4 206 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 CSNK1G2-AS1Q8NCQ2 148 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 TMEM243Q9BU79 118 aa4.42□□□□□ -1.7
HDAC6-210ENST00000441703 MUC2Q02817 5179 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 GHRHP01286 108 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 XCL1P47992 114 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 KRTAP10-1P60331 282 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 ZNF625Q96I27 306 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-210ENST00000441703 Q9H8V8 135 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 XCL2Q9UBD3 114 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
HDAC6-210ENST00000441703 KNCNA6PVL3 124 aa4.4□□□□□ -1.71
HDAC6-210ENST00000441703 F6UB75 175 aa4.4□□□□□ -1.71
HDAC6-210ENST00000441703 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00167Q96N53 147 aa4.4□□□□□ -1.71
HDAC6-210ENST00000441703 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 NDUFC1O43677 76 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 CRPP02741 224 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 DEFB1P60022 68 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 Q9HAA7 133 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
HDAC6-210ENST00000441703 A0A087WVE0 104 aa4.38□□□□□ -1.71
HDAC6-210ENST00000441703 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
HDAC6-210ENST00000441703 H7BZZ5 65 aa4.38□□□□□ -1.71
HDAC6-210ENST00000441703 KLKP1Q107X0 134 aa4.38□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00588Q9Y4M8 146 aa4.38□□□□□ -1.71
HDAC6-210ENST00000441703 IGHV3OR16-12A0A075B7B8 117 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 K7EQG2 157 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 RS1O15537 224 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 DAD1P61803 113 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 COX6A2Q02221 97 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00242Q5T6M2 205 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00467Q9BRT7 94 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 C1orf43Q9BWL3 253 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 ORMDL1Q9P0S3 153 aa4.37□□□□□ -1.71
HDAC6-210ENST00000441703 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 A0A087WYN8 130 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 IGHV3-53P01767 116 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 SEC61GP60059 68 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
HDAC6-210ENST00000441703 C9orf129Q5T035 196 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms