RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 MYH6P13533 1939 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ROBO1Q9Y6N7 1651 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 DNAJC13O75165 2243 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 F5P12259 2224 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ITPR1Q14643 2758 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LRRC37A2A6NM11 1700 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 NWD2Q9ULI1 1742 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LAMA1P25391 3075 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 NKTRP30414 1462 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ERCC6Q03468 1493 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 C1orf167Q5SNV9 1468 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ARAP1Q96P48 1450 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 RGPD2P0DJD1 1756 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 KNL1Q8NG31 2342 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 PLCE1Q9P212 2302 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 COL6A5A8TX70 2615 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 PRDM15P57071 1507 aaPredicted RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 FLGP20930 4061 aaPredicted RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 GCN1Q92616 2671 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 A0A087WXM4 84 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LCE6AA0A183 80 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 GNG14A0A1W2PPG7 69 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SMIM27A0A1W2PRY6 76 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 OOSP1A8MZH6 123 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 TMEM262E9PQX1 116 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 CCDC179H3BU77 68 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 M0R2Z0 102 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 NDUFB6O95139 128 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 COX6CP09669 75 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 TSPAN19P0C672 248 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 IGLC2P0DOY2 106 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 IGLC3P0DOY3 106 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 IFI27P40305 119 aaPredicted RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 RBP2P50120 134 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 CKS1BP61024 79 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 HIST1H1AQ02539 215 aaPredicted RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SMCO1Q147U7 214 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 PMCHL1Q16048 86 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB133Q30KQ1 61 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 BVES-AS1Q5T3Y7 98 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LINC01545Q5VT33 79 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ZNF720Q7Z2F6 126 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SVBPQ8N300 66 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB123Q8N688 67 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 MT1LQ93083 61 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ARL11Q969Q4 196 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SMIM2Q9BVW6 85 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 NMES1Q9C002 83 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 GSKIPQ9P0R6 139 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 C6orf48Q9UBA6 75 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 RABAC1Q9UI14 185 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LENEPQ9Y5L5 61 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SPG11Q96JI7 2443 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 SYNJ1O43426 1573 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 UBR3Q6ZT12 1888 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 CCDC168Q8NDH2 2452 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 TRIOO75962 3097 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 RYR3Q15413 4870 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 MYO9AB2RTY4 2548 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 MTORP42345 2549 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 CHD9Q3L8U1 2897 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 PLCH1Q4KWH8 1693 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 ROCK2O75116 1388 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 TACC2O95359 2948 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 PARP4Q9UKK3 1724 aaKnown RBP-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 LAMA3Q16787 3333 aa-0.21□□□□□ -2.44
PFDN4-202ENST00000441080 UHRF1BP1LA0JNW5 1464 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 GRIN2AQ12879 1464 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 LRRC9Q6ZRR7 1453 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PLEKHH2Q8IVE3 1493 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 FYCO1Q9BQS8 1478 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 KIF20BQ96Q89 1820 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 HERC1Q15751 4861 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PRRC2CQ9Y520 2896 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ZFYVE16Q7Z3T8 1539 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ASXL1Q8IXJ9 1541 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 LRRC7Q96NW7 1537 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 FAM135AQ9P2D6 1515 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ANKRD36A6QL64 1941 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 NWD1Q149M9 1564 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 TMEM131LA2VDJ0 1609 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 TOP2BQ02880 1626 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 UQCRHLA0A096LP55 91 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 A0A1B0GUT8 65 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 FAM24AA6NFZ4 105 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 MRPL33O75394 65 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 NDUFB1O75438 58 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 MT1EP04732 61 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 DBIP07108 87 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 NBEAP1P0C6P0 100 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 FAUP35544 74 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 POLR2KP53803 58 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 COPZ1P61923 177 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 CCL8P80075 99 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 S100A12P80511 92 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 MRPS10P82664 201 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 WT1-ASQ06250 92 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms