RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 IGKV2D-28P01615 120 aa13.11□□□□□ -0.31
VRK2-207ENST00000440705 NAA38Q9BRA0 125 aaKnown RBP13.11□□□□□ -0.31
VRK2-207ENST00000440705 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
VRK2-207ENST00000440705 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.1□□□□□ -0.31
VRK2-207ENST00000440705 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
VRK2-207ENST00000440705 RPL18AQ02543 176 aaKnown RBP13.1□□□□□ -0.31
VRK2-207ENST00000440705 A0A087WTM6 91 aa13.09□□□□□ -0.31
VRK2-207ENST00000440705 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
VRK2-207ENST00000440705 Q8N814 137 aa13.09□□□□□ -0.31
VRK2-207ENST00000440705 KMT2AQ03164 3969 aa13.09□□□□□ -0.31
VRK2-207ENST00000440705 H7C2G1 150 aa13.08□□□□□ -0.31
VRK2-207ENST00000440705 Q1RN00 199 aa13.08□□□□□ -0.31
VRK2-207ENST00000440705 A0A1W2PPM0 123 aa13.08□□□□□ -0.32
VRK2-207ENST00000440705 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.32
VRK2-207ENST00000440705 DNAH6Q9C0G6 4158 aa13.06□□□□□ -0.32
VRK2-207ENST00000440705 FABP2P12104 132 aa13.06□□□□□ -0.32
VRK2-207ENST00000440705 PRR3P79522 188 aaKnown RBP13.05□□□□□ -0.32
VRK2-207ENST00000440705 VAMP3Q15836 100 aa13.05□□□□□ -0.32
VRK2-207ENST00000440705 Q8NDZ9 215 aa13.05□□□□□ -0.32
VRK2-207ENST00000440705 PKIGQ9Y2B9 76 aa13.05□□□□□ -0.32
VRK2-207ENST00000440705 PSMB2P49721 201 aa13.04□□□□□ -0.32
VRK2-207ENST00000440705 GAGE2BQ13066 116 aa13.04□□□□□ -0.32
VRK2-207ENST00000440705 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
VRK2-207ENST00000440705 C9orf163Q8N9P6 203 aa13.04□□□□□ -0.32
VRK2-207ENST00000440705 OR13C6PQ8NH95 151 aa13.04□□□□□ -0.32
VRK2-207ENST00000440705 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
VRK2-207ENST00000440705 NCR3O14931 201 aa13.02□□□□□ -0.32
VRK2-207ENST00000440705 LYRM7Q5U5X0 104 aa13.02□□□□□ -0.32
VRK2-207ENST00000440705 TMEM126AQ9H061 195 aa13.02□□□□□ -0.33
VRK2-207ENST00000440705 VPREB1P12018 145 aa13.01□□□□□ -0.33
VRK2-207ENST00000440705 PLA2G2DQ9UNK4 145 aa13.01□□□□□ -0.33
VRK2-207ENST00000440705 LCE6AA0A183 80 aa13□□□□□ -0.33
VRK2-207ENST00000440705 C16orf90A8MZG2 172 aa13□□□□□ -0.33
VRK2-207ENST00000440705 S100A7L2Q5SY68 101 aa13□□□□□ -0.33
VRK2-207ENST00000440705 COX6CP09669 75 aa12.99□□□□□ -0.33
VRK2-207ENST00000440705 SCGB1C2P0DMR2 95 aa12.99□□□□□ -0.33
VRK2-207ENST00000440705 TRIAP1O43715 76 aa12.98□□□□□ -0.33
VRK2-207ENST00000440705 SPCS1Q9Y6A9 102 aa12.98□□□□□ -0.33
VRK2-207ENST00000440705 GAGE10A6NGK3 116 aa12.97□□□□□ -0.33
VRK2-207ENST00000440705 M0R378 163 aa12.97□□□□□ -0.33
VRK2-207ENST00000440705 RTL8CO15255 209 aa12.97□□□□□ -0.33
VRK2-207ENST00000440705 RPL28P46779 137 aaKnown RBP12.97□□□□□ -0.33
VRK2-207ENST00000440705 GTF2H5Q6ZYL4 71 aa12.97□□□□□ -0.33
VRK2-207ENST00000440705 A0A096LNI7 61 aa12.96□□□□□ -0.33
VRK2-207ENST00000440705 TNP2Q05952 138 aa12.96□□□□□ -0.33
VRK2-207ENST00000440705 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.33
VRK2-207ENST00000440705 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.34
VRK2-207ENST00000440705 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
VRK2-207ENST00000440705 K7EP34 96 aa12.95□□□□□ -0.34
VRK2-207ENST00000440705 IGLV6-57P01721 117 aa12.95□□□□□ -0.34
VRK2-207ENST00000440705 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
VRK2-207ENST00000440705 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
VRK2-207ENST00000440705 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
VRK2-207ENST00000440705 TRBV20-1A0A075B6N2 111 aa12.93□□□□□ -0.34
VRK2-207ENST00000440705 IGKV2-24A0A0C4DH68 120 aa12.93□□□□□ -0.34
VRK2-207ENST00000440705 LINC00474Q9P2X8 69 aa12.93□□□□□ -0.34
VRK2-207ENST00000440705 UBE2V1Q13404 147 aa12.93□□□□□ -0.34
VRK2-207ENST00000440705 FAM168BA1KXE4 195 aa12.92□□□□□ -0.34
VRK2-207ENST00000440705 LINC01620Q4KN68 170 aa12.91□□□□□ -0.34
VRK2-207ENST00000440705 CBY1Q9Y3M2 126 aa12.91□□□□□ -0.34
VRK2-207ENST00000440705 IGLV5-52A0A0A0MRZ9 124 aa12.9□□□□□ -0.34
VRK2-207ENST00000440705 TRBV10-3A0A0K0K1G6 114 aa12.9□□□□□ -0.34
VRK2-207ENST00000440705 TCL1BO95988 128 aa12.89□□□□□ -0.35
VRK2-207ENST00000440705 FAM19A5Q7Z5A7 132 aaPredicted RBP12.89□□□□□ -0.35
VRK2-207ENST00000440705 C22orf24Q9Y442 160 aa12.88□□□□□ -0.35
VRK2-207ENST00000440705 KRTAP7-1Q8IUC3 87 aa12.87□□□□□ -0.35
VRK2-207ENST00000440705 C7orf33Q8WU49 177 aa12.87□□□□□ -0.35
VRK2-207ENST00000440705 HYDINQ4G0P3 5121 aa12.87□□□□□ -0.35
VRK2-207ENST00000440705 DNAH17Q9UFH2 4485 aa12.87□□□□□ -0.35
VRK2-207ENST00000440705 H0YGX0 51 aa12.86□□□□□ -0.35
VRK2-207ENST00000440705 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
VRK2-207ENST00000440705 ATXN8Q156A1 80 aa12.86□□□□□ -0.35
VRK2-207ENST00000440705 TRAV23DV6A0A075B6W5 121 aa12.86□□□□□ -0.35
VRK2-207ENST00000440705 H3BMG7 143 aa12.86□□□□□ -0.35
VRK2-207ENST00000440705 FUSP35637 526 aaKnown RBP eCLIP12.85□□□□□ -0.35
VRK2-207ENST00000440705 MRPL55Q7Z7F7 128 aaKnown RBP12.85□□□□□ -0.35
VRK2-207ENST00000440705 CLEC2BQ92478 149 aa12.85□□□□□ -0.35
VRK2-207ENST00000440705 A0A1W2PNN7 141 aa12.84□□□□□ -0.35
VRK2-207ENST00000440705 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
VRK2-207ENST00000440705 LINC00167Q96N53 147 aa12.83□□□□□ -0.36
VRK2-207ENST00000440705 M0QXV9 152 aa12.82□□□□□ -0.36
VRK2-207ENST00000440705 LST1O00453 97 aa12.82□□□□□ -0.36
VRK2-207ENST00000440705 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
VRK2-207ENST00000440705 KCNQ1DNQ9H478 68 aa12.82□□□□□ -0.36
VRK2-207ENST00000440705 FRAS1Q86XX4 4008 aa12.82□□□□□ -0.36
VRK2-207ENST00000440705 ZNF73O43830 326 aaPredicted RBP12.81□□□□□ -0.36
VRK2-207ENST00000440705 SPACA4Q8TDM5 124 aa12.81□□□□□ -0.36
VRK2-207ENST00000440705 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
VRK2-207ENST00000440705 SACSQ9NZJ4 4579 aa12.81□□□□□ -0.36
VRK2-207ENST00000440705 IGLV1-50A0A075B6I6 118 aa12.8□□□□□ -0.36
VRK2-207ENST00000440705 LINC00336Q6ZUF6 198 aa12.8□□□□□ -0.36
VRK2-207ENST00000440705 KRTAP10-2P60368 255 aa12.8□□□□□ -0.36
VRK2-207ENST00000440705 RPL37AP8A6NKH3 93 aa12.79□□□□□ -0.36
VRK2-207ENST00000440705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
VRK2-207ENST00000440705 TRBV7-6A0A0J9YX20 115 aa12.78□□□□□ -0.36
VRK2-207ENST00000440705 PANO1I0J062 215 aa12.78□□□□□ -0.36
VRK2-207ENST00000440705 FAM218AQ96MZ4 157 aa12.77□□□□□ -0.36
VRK2-207ENST00000440705 PRYO14603 147 aa12.77□□□□□ -0.37
VRK2-207ENST00000440705 TRACP01848 142 aa12.77□□□□□ -0.37
VRK2-207ENST00000440705 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms