RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
CPSF7-205ENST00000439958 GAGE2BQ13066 116 aa9.96□□□□□ -0.81
CPSF7-205ENST00000439958 COX17Q14061 63 aa9.96□□□□□ -0.81
CPSF7-205ENST00000439958 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
CPSF7-205ENST00000439958 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
CPSF7-205ENST00000439958 Q8NDZ9 215 aa9.94□□□□□ -0.82
CPSF7-205ENST00000439958 SLC25A20O43772 301 aa9.94□□□□□ -0.82
CPSF7-205ENST00000439958 F8W1H4 67 aa9.94□□□□□ -0.82
CPSF7-205ENST00000439958 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
CPSF7-205ENST00000439958 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
CPSF7-205ENST00000439958 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
CPSF7-205ENST00000439958 OCIAD2Q56VL3 154 aa9.92□□□□□ -0.82
CPSF7-205ENST00000439958 LY6G6CO95867 125 aa9.92□□□□□ -0.82
CPSF7-205ENST00000439958 DNAL4O96015 105 aa9.92□□□□□ -0.82
CPSF7-205ENST00000439958 Q6ZRP5 223 aa9.91□□□□□ -0.82
CPSF7-205ENST00000439958 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-205ENST00000439958 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
CPSF7-205ENST00000439958 VPS25Q9BRG1 176 aa9.9□□□□□ -0.82
CPSF7-205ENST00000439958 C6orf99Q4VX62 202 aa9.9□□□□□ -0.83
CPSF7-205ENST00000439958 K7ERU9 68 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 SLPIP03973 132 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 C2orf48Q96LS8 159 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 FAM218AQ96MZ4 157 aa9.89□□□□□ -0.83
CPSF7-205ENST00000439958 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-205ENST00000439958 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF7-205ENST00000439958 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
CPSF7-205ENST00000439958 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
CPSF7-205ENST00000439958 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 TRBV10-3A0A0K0K1G6 114 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 A0A087WYN8 130 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 LST1O00453 97 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 MUC7Q8TAX7 377 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
CPSF7-205ENST00000439958 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
CPSF7-205ENST00000439958 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
CPSF7-205ENST00000439958 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
CPSF7-205ENST00000439958 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
CPSF7-205ENST00000439958 FAM168BA1KXE4 195 aa9.85□□□□□ -0.83
CPSF7-205ENST00000439958 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
CPSF7-205ENST00000439958 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
CPSF7-205ENST00000439958 STARD9Q9P2P6 4700 aa9.83□□□□□ -0.84
CPSF7-205ENST00000439958 DNAH7Q8WXX0 4024 aa9.83□□□□□ -0.84
CPSF7-205ENST00000439958 NDUFC2O95298 119 aa9.83□□□□□ -0.84
CPSF7-205ENST00000439958 TEX49A0A1B0GTD5 131 aa9.83□□□□□ -0.84
CPSF7-205ENST00000439958 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
CPSF7-205ENST00000439958 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
CPSF7-205ENST00000439958 J3QR89 54 aa9.82□□□□□ -0.84
CPSF7-205ENST00000439958 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
CPSF7-205ENST00000439958 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
CPSF7-205ENST00000439958 TEN1Q86WV5 123 aa9.81□□□□□ -0.84
CPSF7-205ENST00000439958 TRAV23DV6A0A075B6W5 121 aa9.8□□□□□ -0.84
CPSF7-205ENST00000439958 H0YGX0 51 aa9.79□□□□□ -0.84
CPSF7-205ENST00000439958 CHTF8P0CG12 524 aa9.79□□□□□ -0.84
CPSF7-205ENST00000439958 VPREB1P12018 145 aa9.79□□□□□ -0.84
CPSF7-205ENST00000439958 SNCGO76070 127 aa9.78□□□□□ -0.84
CPSF7-205ENST00000439958 DIRC1Q969H9 104 aa9.77□□□□□ -0.84
CPSF7-205ENST00000439958 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
CPSF7-205ENST00000439958 M0R378 163 aa9.77□□□□□ -0.85
CPSF7-205ENST00000439958 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
CPSF7-205ENST00000439958 ZNF73O43830 326 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-205ENST00000439958 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
CPSF7-205ENST00000439958 WWC2-AS2Q96NR7 200 aa9.76□□□□□ -0.85
CPSF7-205ENST00000439958 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
CPSF7-205ENST00000439958 A0A096LNI7 61 aa9.74□□□□□ -0.85
CPSF7-205ENST00000439958 TRACP01848 142 aa9.74□□□□□ -0.85
CPSF7-205ENST00000439958 C7orf33Q8WU49 177 aa9.74□□□□□ -0.85
CPSF7-205ENST00000439958 C14orf177Q52M58 125 aa9.74□□□□□ -0.85
CPSF7-205ENST00000439958 H3BT86 120 aa9.73□□□□□ -0.85
CPSF7-205ENST00000439958 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
CPSF7-205ENST00000439958 ORMDL1Q9P0S3 153 aa9.72□□□□□ -0.85
CPSF7-205ENST00000439958 COX7BP24311 80 aa9.72□□□□□ -0.85
CPSF7-205ENST00000439958 DEFB105AQ8NG35 78 aa9.72□□□□□ -0.85
CPSF7-205ENST00000439958 F8WDY8 70 aa9.71□□□□□ -0.85
CPSF7-205ENST00000439958 Q6ZQY7 126 aa9.71□□□□□ -0.85
CPSF7-205ENST00000439958 C22orf24Q9Y442 160 aa9.71□□□□□ -0.85
CPSF7-205ENST00000439958 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
CPSF7-205ENST00000439958 Q8N814 137 aa9.71□□□□□ -0.86
CPSF7-205ENST00000439958 UBE2BP63146 152 aa9.7□□□□□ -0.86
CPSF7-205ENST00000439958 M0QXV9 152 aa9.7□□□□□ -0.86
CPSF7-205ENST00000439958 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
CPSF7-205ENST00000439958 LAMTOR3Q9UHA4 124 aa9.7□□□□□ -0.86
CPSF7-205ENST00000439958 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
CPSF7-205ENST00000439958 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
CPSF7-205ENST00000439958 ETDCA0A1B0GVM5 59 aa9.68□□□□□ -0.86
CPSF7-205ENST00000439958 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
CPSF7-205ENST00000439958 GAGE2AQ6NT46 116 aa9.67□□□□□ -0.86
CPSF7-205ENST00000439958 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
CPSF7-205ENST00000439958 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
CPSF7-205ENST00000439958 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
CPSF7-205ENST00000439958 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
CPSF7-205ENST00000439958 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
CPSF7-205ENST00000439958 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
CPSF7-205ENST00000439958 A0A087WTM6 91 aa9.65□□□□□ -0.86
CPSF7-205ENST00000439958 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
CPSF7-205ENST00000439958 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.87
CPSF7-205ENST00000439958 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
CPSF7-205ENST00000439958 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
CPSF7-205ENST00000439958 PHF5AQ7RTV0 110 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms