RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 HIGD2BQ4VC39 106 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 SDIM1Q6ZPB5 146 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 PCP2Q8IVA1 136 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 C15orf56Q8N910 161 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 LINC00526Q96FQ7 95 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 C14orf144Q96I85 54 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 TTTY13Q9BZ97 58 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
AC011228.1-201ENST00000439027 KIAA0087Q14695 138 aa5.87□□□□□ -1.47
AC011228.1-201ENST00000439027 Q8IZM0 81 aa5.87□□□□□ -1.47
AC011228.1-201ENST00000439027 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 CKS1BP61024 79 aa5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 CNBPP62633 177 aaKnown RBP5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 C2orf82Q6UX34 121 aa5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 NDUFA12Q9UI09 145 aa5.86□□□□□ -1.47
AC011228.1-201ENST00000439027 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 ZNF815PA8K554 130 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 NDUFA1O15239 70 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 COX8AP10176 69 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 TP73-AS1Q9UF72 201 aa5.85□□□□□ -1.47
AC011228.1-201ENST00000439027 SLPIP03973 132 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 C10orf25Q5T742 122 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 SLC25A34Q6PIV7 304 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 BOD1L2Q8IYS8 172 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 ZNF625Q96I27 306 aaPredicted RBP5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 CAMK2N2Q96S95 79 aa5.84□□□□□ -1.47
AC011228.1-201ENST00000439027 A0A087WYN8 130 aa5.83□□□□□ -1.48
AC011228.1-201ENST00000439027 CXCL5P42830 114 aa5.83□□□□□ -1.48
AC011228.1-201ENST00000439027 A0A0J9YXY3 114 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 DLEU1O43261 78 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 HERV-K104P63124 156 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 SYCNQ0VAF6 134 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 CIRBPQ14011 172 aaKnown RBP5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 Q6ZRU5 148 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 UQCR10Q9UDW1 63 aa5.82□□□□□ -1.48
AC011228.1-201ENST00000439027 IGKV2-24A0A0C4DH68 120 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 F8WDY8 70 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 TSTD3H0UI37 97 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 PFN2P35080 140 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 C9orf116Q5BN46 136 aaPredicted RBP5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 MEIG1Q5JSS6 88 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 SPACA4Q8TDM5 124 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 C7orf33Q8WU49 177 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 MIEN1Q9BRT3 115 aa5.81□□□□□ -1.48
AC011228.1-201ENST00000439027 TRBV30A0A0K0K1B3 111 aa5.8□□□□□ -1.48
AC011228.1-201ENST00000439027 SMIM13P0DJ93 91 aa5.8□□□□□ -1.48
AC011228.1-201ENST00000439027 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
AC011228.1-201ENST00000439027 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
AC011228.1-201ENST00000439027 C6orf48Q9UBA6 75 aa5.8□□□□□ -1.48
AC011228.1-201ENST00000439027 LINC00158P58513 81 aa5.79□□□□□ -1.48
AC011228.1-201ENST00000439027 C2orf91Q6ZV80 131 aa5.79□□□□□ -1.48
AC011228.1-201ENST00000439027 ERG28Q9UKR5 140 aa5.79□□□□□ -1.48
AC011228.1-201ENST00000439027 LINC00587B1AMM8 73 aa5.78□□□□□ -1.48
AC011228.1-201ENST00000439027 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
AC011228.1-201ENST00000439027 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
AC011228.1-201ENST00000439027 TMEM238C9JI98 176 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 TIMM17BO60830 172 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 SRSF9Q13242 221 aaKnown RBP eCLIP5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 COX17Q14061 63 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 DAND5Q8N907 189 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 LITAFQ99732 161 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 TNXBP22105 4242 aa5.77□□□□□ -1.49
AC011228.1-201ENST00000439027 NPC2P61916 151 aa5.76□□□□□ -1.49
AC011228.1-201ENST00000439027 RPL18AQ02543 176 aaKnown RBP5.76□□□□□ -1.49
AC011228.1-201ENST00000439027 MIR7-3HGQ8N6C7 128 aa5.76□□□□□ -1.49
AC011228.1-201ENST00000439027 HIST1H4GQ99525 98 aa5.76□□□□□ -1.49
AC011228.1-201ENST00000439027 A0A096LNI7 61 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 PCP4L1A6NKN8 68 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 DDTP30046 118 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 CTAG1AP78358 180 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 PRR3P79522 188 aaKnown RBP5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 SPANXB1Q9NS25 103 aaPredicted RBP5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 PKIGQ9Y2B9 76 aa5.75□□□□□ -1.49
AC011228.1-201ENST00000439027 LOC107984640A0A0U1RRK4 108 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 GAGE2BQ13066 116 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 Q6ZRP5 223 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 SPANXDQ9BXN6 97 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 SND1-IT1Q9HBX3 110 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 XAGE1AQ9HD64 81 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 SPANXCQ9NY87 97 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 LINC00474Q9P2X8 69 aa5.74□□□□□ -1.49
AC011228.1-201ENST00000439027 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
AC011228.1-201ENST00000439027 Q6ZVH6 145 aa5.73□□□□□ -1.49
AC011228.1-201ENST00000439027 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
AC011228.1-201ENST00000439027 LINC00308Q8TCZ7 52 aa5.73□□□□□ -1.49
AC011228.1-201ENST00000439027 LRP2P98164 4655 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms