RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 WFDC10BQ8IUB3 73 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 CELA1Q9UNI1 258 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 FREM2Q5SZK8 3169 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 Q6ZTC4 211 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 TRAV10A0A0B4J240 114 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
CSDE1-205ENST00000438362 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 MPLKIPQ8TAP9 179 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 FAM104AQ969W3 186 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 C2orf48Q96LS8 159 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 RETNQ9HD89 108 aa4.59□□□□□ -1.67
CSDE1-205ENST00000438362 GIG44P09565 113 aaPredicted RBP4.59□□□□□ -1.68
CSDE1-205ENST00000438362 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.68
CSDE1-205ENST00000438362 Q6ZRU5 148 aa4.59□□□□□ -1.68
CSDE1-205ENST00000438362 FLNAP21333 2647 aaKnown RBP4.58□□□□□ -1.68
CSDE1-205ENST00000438362 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
CSDE1-205ENST00000438362 CXCL6P80162 114 aa4.58□□□□□ -1.68
CSDE1-205ENST00000438362 A0A0J9YWU9 116 aa4.58□□□□□ -1.68
CSDE1-205ENST00000438362 PLAC8L1A1L4L8 177 aa4.58□□□□□ -1.68
CSDE1-205ENST00000438362 NDUFS5O43920 106 aa4.58□□□□□ -1.68
CSDE1-205ENST00000438362 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 Q6ZQT0 140 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
CSDE1-205ENST00000438362 C14orf177Q52M58 125 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 C4orf48Q5BLP8 95 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 H0Y9J4 135 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 LINC00528Q8N1L1 170 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 KALRNO60229 2985 aa4.57□□□□□ -1.68
CSDE1-205ENST00000438362 F8WDY8 70 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 BCE1O60756 84 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 C19orf73Q9NVV2 129 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 A0A096LNI7 61 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 B9D2Q9BPU9 175 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
CSDE1-205ENST00000438362 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 MYO15AQ9UKN7 3530 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 ZFHX4Q86UP3 3567 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 WFDC13Q8IUB5 93 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-205ENST00000438362 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
CSDE1-205ENST00000438362 PRYO14603 147 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 ELOF1P60002 83 aaKnown RBP4.54□□□□□ -1.68
CSDE1-205ENST00000438362 F8P00451 2351 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 TRBV7-6A0A0J9YX20 115 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 Q8N9L7 120 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 Q8NAQ8 132 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
CSDE1-205ENST00000438362 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
CSDE1-205ENST00000438362 GVQW2A0A096LPI5 108 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-205ENST00000438362 DMDP11532 3685 aa4.53□□□□□ -1.68
CSDE1-205ENST00000438362 PRR4Q16378 134 aa4.53□□□□□ -1.68
CSDE1-205ENST00000438362 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
CSDE1-205ENST00000438362 ESRGQ1W209 222 aa4.52□□□□□ -1.69
CSDE1-205ENST00000438362 C7orf33Q8WU49 177 aa4.52□□□□□ -1.69
CSDE1-205ENST00000438362 HECTD1Q9ULT8 2610 aa4.52□□□□□ -1.69
CSDE1-205ENST00000438362 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
CSDE1-205ENST00000438362 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
CSDE1-205ENST00000438362 A0A0U1RQV1 116 aa4.51□□□□□ -1.69
CSDE1-205ENST00000438362 H3BNG1 76 aa4.51□□□□□ -1.69
CSDE1-205ENST00000438362 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
CSDE1-205ENST00000438362 CFAP46Q8IYW2 2715 aa4.51□□□□□ -1.69
CSDE1-205ENST00000438362 TACC2O95359 2948 aa4.51□□□□□ -1.69
CSDE1-205ENST00000438362 VPREB1P12018 145 aa4.5□□□□□ -1.69
CSDE1-205ENST00000438362 ATMQ13315 3056 aa4.5□□□□□ -1.69
CSDE1-205ENST00000438362 USP34Q70CQ2 3546 aa4.5□□□□□ -1.69
CSDE1-205ENST00000438362 PRR34Q9NV39 138 aa4.5□□□□□ -1.69
CSDE1-205ENST00000438362 C22orf24Q9Y442 160 aa4.5□□□□□ -1.69
CSDE1-205ENST00000438362 ATRQ13535 2644 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 CHD6Q8TD26 2715 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 LINC00167Q96N53 147 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 TM2D3Q9BRN9 247 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 USP24Q9UPU5 2620 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 LRBAP50851 2863 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 V9GYY9 64 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 A0A087WSZ3 146 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 KRTAP1-3Q8IUG1 177 aa4.49□□□□□ -1.69
CSDE1-205ENST00000438362 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 LINC00208Q96KT6 92 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 FLNBO75369 2602 aaKnown RBP4.48□□□□□ -1.69
CSDE1-205ENST00000438362 LRCOL1A6NCL2 159 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 A0A1B0GW54 56 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 CFAP47Q6ZTR5 3102 aa4.48□□□□□ -1.69
CSDE1-205ENST00000438362 Q6ZRP5 223 aa4.47□□□□□ -1.69
CSDE1-205ENST00000438362 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
CSDE1-205ENST00000438362 HCG22E2RYF7 251 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 LCE2BO14633 110 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 WIPF1O43516 503 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 Q6ZRX8 168 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 Q8NBF4 154 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms